DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sar1 and Arf6

DIOPT Version :9

Sequence 1:NP_732717.1 Gene:Sar1 / 42615 FlyBaseID:FBgn0038947 Length:193 Species:Drosophila melanogaster
Sequence 2:NP_077066.1 Gene:Arf6 / 79121 RGDID:621279 Length:175 Species:Rattus norvegicus


Alignment Length:170 Identity:51/170 - (30%)
Similarity:85/170 - (50%) Gaps:12/170 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 KSGKLLFLGLDNAGKTTLLHMLKDDKLAQHVPTLHPTSEELSIGNMRFTTFDLGGHTQARRVWKD 83
            |..::|.||||.|||||:|:.||..:....:||:....|.::..|::|..:|:||..:.|.:|:.
  Rat    12 KEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRH 76

  Fly    84 YFPAVDAIVFLIDAWDRGRFQESKNELDSLLTDEALSNCPVLILGNKIDKPGAASEDELRNVFGL 148
            |:.....::|::|..||.|..|::.||..::.|..:.:..:||..||.|.|.|....|::...||
  Rat    77 YYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGL 141

  Fly   149 YQLTTGKGKVARADLPGRPLELFMCSVLKRQGYGEGFRWL 188
            .::......|..:           |:. ...|..||..||
  Rat   142 TRIRDRNWYVQPS-----------CAT-SGDGLYEGLTWL 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sar1NP_732717.1 Sar1 2..192 CDD:206645 51/170 (30%)
Arf6NP_077066.1 ARF 1..175 CDD:128474 51/170 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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