DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sar1 and Arl3

DIOPT Version :10

Sequence 1:NP_732717.1 Gene:Sar1 / 42615 FlyBaseID:FBgn0038947 Length:193 Species:Drosophila melanogaster
Sequence 2:XP_006231621.1 Gene:Arl3 / 64664 RGDID:69327 Length:186 Species:Rattus norvegicus


Alignment Length:190 Identity:58/190 - (30%)
Similarity:93/190 - (48%) Gaps:19/190 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LGYLGLWKK-------SGKLLFLGLDNAGKTTLLHMLKDDKLAQHVPTLHPTSEELSIGNMRFTT 68
            :|.|.:.:|       ..::|.||||||||||||..|..:.::...||.....:.:.....:...
  Rat     5 VGLLSILRKLKSAPDQEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNV 69

  Fly    69 FDLGGHTQARRVWKDYFPAVDAIVFLIDAWDRGRFQESKNELDSLLTDEALSNCPVLILGNKIDK 133
            :|:||..:.|..|:.||...|.::::||:.||.||:|:..||..||.:|.||..|||:..||.|.
  Rat    70 WDIGGQRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLVFANKQDL 134

  Fly   134 PGAASEDELRNVFGLYQLTTGKGKVARADLPGRPLELFMCSVLKRQGYGEGFRWLAQYID 193
            ..||...|:.....|:.:.            .|..::..||.|..:|..:|..|:.:.::
  Rat   135 LTAAPAAEIAEGLNLHTIR------------DRVWQIQSCSALTGEGVQDGMNWVCKNVN 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sar1NP_732717.1 Sar1 2..192 CDD:206645 58/187 (31%)
Arl3XP_006231621.1 Arl3 7..180 CDD:206721 57/184 (31%)

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