DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sar1 and Arl13a

DIOPT Version :10

Sequence 1:NP_732717.1 Gene:Sar1 / 42615 FlyBaseID:FBgn0038947 Length:193 Species:Drosophila melanogaster
Sequence 2:NP_001019537.1 Gene:Arl13a / 501617 RGDID:1562947 Length:395 Species:Rattus norvegicus


Alignment Length:192 Identity:51/192 - (26%)
Similarity:87/192 - (45%) Gaps:34/192 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 WKK----SGK-----LLFLGLDNAGKTTLLHMLKDDKLAQHVPT-----LHPTSEELSIGNMRFT 67
            |.:    .||     ::.:||||:||:.|:...:     :.:|:     :.||...|.:.:.:.:
  Rat     9 WSRQKATEGKQRNVTIIVIGLDNSGKSHLVAAFQ-----RLIPSKMHSEMRPTQTTLLLDDYQVS 68

  Fly    68 TFDLGGHTQARRVWKDYFPAVDAIVFLIDAWDRGRFQESKNELDSLLTDEALSNCPVLILGNKID 132
            .:||.|..:.|..|.:|:.....:||::|:.|..|.||.|..|..|:.|:.:|..|:|||.||.|
  Rat    69 VYDLTGDLKGREKWPNYYAEAHGLVFVVDSSDIARIQEVKIILTRLMFDKRVSGKPILILANKQD 133

  Fly   133 KPGAASEDELRNVFGLYQLTTGKGKVARADLPGRPLELFMCSVLK------RQGYGEGFRWL 188
            |..|....::.....|.:|......:.|.:         .||.::      :|....|.|||
  Rat   134 KKDALLPCDIIEYLLLERLVNETKSMCRVE---------PCSTIRNLPKRHQQPIVIGLRWL 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sar1NP_732717.1 Sar1 2..192 CDD:206645 51/192 (27%)
Arl13aNP_001019537.1 Arl2l1_Arl13_like 23..189 CDD:133361 48/178 (27%)

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