DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sar1 and Arl5c

DIOPT Version :10

Sequence 1:NP_732717.1 Gene:Sar1 / 42615 FlyBaseID:FBgn0038947 Length:193 Species:Drosophila melanogaster
Sequence 2:XP_038942560.1 Gene:Arl5c / 497990 RGDID:1563128 Length:221 Species:Rattus norvegicus


Alignment Length:156 Identity:42/156 - (26%)
Similarity:65/156 - (41%) Gaps:16/156 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 LHMLKDDKLAQHV----PTLHPTSEELSIGNMRFTTFDLGGHTQARRVWKDYFPAVDAIVFLIDA 97
            ||:.|...|...|    .|:....||:......|..:||||....|..|:.|:...:.::.:||:
  Rat    71 LHLDKTPSLTNEVVHTCSTIGSNVEEIVFQRTHFLMWDLGGQEALRSTWETYYSNAEFVILVIDS 135

  Fly    98 WDRGRFQESKNELDSLLTDEALSNCPVLILGNKIDKPGAASEDELRNVFGLYQLTTGKGKVARAD 162
            .||.|...|:.||..:|..|||.:..|||..||.|...:.:..|:.....|            :.
  Rat   136 TDRNRLSTSREELYKILAHEALQDASVLIFANKQDVKDSMTTAEISQFLTL------------SA 188

  Fly   163 LPGRPLELFMCSVLKRQGYGEGFRWL 188
            :...|..:..|..|..:|...|.:|:
  Rat   189 IKDHPWHIQGCCALTGEGLLAGLQWM 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sar1NP_732717.1 Sar1 2..192 CDD:206645 42/156 (27%)
Arl5cXP_038942560.1 P-loop containing Nucleoside Triphosphate Hydrolases <79..217 CDD:476819 39/148 (26%)

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