DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sar1 and arl5b

DIOPT Version :10

Sequence 1:NP_732717.1 Gene:Sar1 / 42615 FlyBaseID:FBgn0038947 Length:193 Species:Drosophila melanogaster
Sequence 2:NP_001006744.1 Gene:arl5b / 448415 XenbaseID:XB-GENE-996906 Length:179 Species:Xenopus tropicalis


Alignment Length:186 Identity:52/186 - (27%)
Similarity:84/186 - (45%) Gaps:21/186 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 IWDWFTGVLGYLGLWKKSGKLLFLGLDNAGKTTLLHMLKDDKLAQHVPTLHPTSEELSIGNMRFT 67
            :|::|.         .:..|::.:|||||||||||:....:::....||:....||:.:.|..|.
 Frog     8 LWNFFC---------NQEHKVIIVGLDNAGKTTLLYQFLMNEVVHTSPTIGSNVEEIVVKNTHFL 63

  Fly    68 TFDLGGHTQARRVWKDYFPAVDAIVFLIDAWDRGRFQESKNELDSLLTDEALSNCPVLILGNKID 132
            .:|:||....|..|..|:...:.|:.::|:.||.|...:|.||..:|..|.|....|||..||.|
 Frog    64 MWDIGGQESLRSSWNTYYSNTEFIILVVDSTDRERLSITKEELYRMLAHEDLRKAAVLIFANKQD 128

  Fly   133 KPGAASEDELRNVFGLYQLTTGKGKVARADLPGRPLELFMCSVLKRQGYGEGFRWL 188
            ..|..|..::.....|            :.:...|..:..|..|..:|..:|..|:
 Frog   129 IKGCMSAADISKYLTL------------SSIKDHPWHIQSCCALTGEGLCQGLEWM 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sar1NP_732717.1 Sar1 2..192 CDD:206645 52/186 (28%)
arl5bNP_001006744.1 Arl5_Arl8 3..175 CDD:133353 52/186 (28%)

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