DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sar1 and arf4a

DIOPT Version :10

Sequence 1:NP_732717.1 Gene:Sar1 / 42615 FlyBaseID:FBgn0038947 Length:193 Species:Drosophila melanogaster
Sequence 2:NP_001003590.1 Gene:arf4a / 445196 ZFINID:ZDB-GENE-040801-109 Length:180 Species:Danio rerio


Alignment Length:177 Identity:61/177 - (34%)
Similarity:93/177 - (52%) Gaps:16/177 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 KKSGKLLFLGLDNAGKTTLLHMLKDDKLAQHVPTLHPTSEELSIGNMRFTTFDLGGHTQARRVWK 82
            ||..::|.:|||.|||||:|:.||..::...:||:....|.:...|:.||.:|:||..:.|.:|:
Zfish    15 KKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWR 79

  Fly    83 DYFPAVDAIVFLIDAWDRGRFQESKNELDSLLTDEALSNCPVLILGNKIDKPGAASEDELRNVFG 147
            .||.....::|::|:.||.|.|||..||..:|.::.|.:..:||..||.|.|.|....||.:..|
Zfish    80 HYFQNTQGLIFVVDSNDRERAQESAEELQKMLQEDELRDAVLLIFANKQDLPNAMPISELTDKLG 144

  Fly   148 LYQLTTGKGKVARADLPGRPLELFMCSVLKRQGYG--EGFRWLAQYI 192
            |..|.:....|..|           |:.   ||.|  ||..||::.:
Zfish   145 LQNLRSRTWYVQAA-----------CAT---QGTGLYEGLDWLSEQL 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sar1NP_732717.1 Sar1 2..192 CDD:206645 61/175 (35%)
arf4aNP_001003590.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..180 CDD:476819 61/177 (34%)

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