DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sar1 and CG17819

DIOPT Version :9

Sequence 1:NP_732717.1 Gene:Sar1 / 42615 FlyBaseID:FBgn0038947 Length:193 Species:Drosophila melanogaster
Sequence 2:NP_650994.1 Gene:CG17819 / 42579 FlyBaseID:FBgn0038915 Length:186 Species:Drosophila melanogaster


Alignment Length:172 Identity:54/172 - (31%)
Similarity:87/172 - (50%) Gaps:13/172 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LLFLGLDNAGKTTLLHMLKDDKLAQHVPTLHPTSE-ELSIGNMRFTTFDLGGHTQARRVWKDYFP 86
            ||.||||||||:||...|.:....:...:.:..|| ..:|.|.|...:|:.|..:.|::|..|:.
  Fly    23 LLILGLDNAGKSTLTDRLAEIFNGESKESNNQVSEWSFTINNFRVQLWDINGELKNRQIWPKYYK 87

  Fly    87 AVDAIVFLIDAWDRGRFQESKNELDSLLTDEALSNCPVLILGNKIDKPGAASEDELRNVFGLYQL 151
            .|:.::|::|:.|..|..|::..|..:|..:.|.|.|:||:.||.|..|:.|...:.::.|||:|
  Fly    88 KVNVLIFVLDSTDALRLSEARCVLCDVLMHQELDNAPLLIVSNKKDASGSLSMSTVIDLMGLYRL 152

  Fly   152 TTGKGKVARADLPGRPLELFMCSVLKRQGYGEGFRWLAQYID 193
            |            ||......||:....|..|...|:.:.|:
  Fly   153 T------------GRDWTFEECSMRTGSGVQEIVNWINEKIN 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sar1NP_732717.1 Sar1 2..192 CDD:206645 53/169 (31%)
CG17819NP_650994.1 Arf_Arl 22..180 CDD:206644 53/168 (32%)
Ras 23..183 CDD:278499 54/172 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455835
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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