DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sar1 and arf1

DIOPT Version :10

Sequence 1:NP_732717.1 Gene:Sar1 / 42615 FlyBaseID:FBgn0038947 Length:193 Species:Drosophila melanogaster
Sequence 2:NP_989018.1 Gene:arf1 / 394614 XenbaseID:XB-GENE-950251 Length:181 Species:Xenopus tropicalis


Alignment Length:188 Identity:57/188 - (30%)
Similarity:96/188 - (51%) Gaps:21/188 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 FTGVLGYLGLWKKSGKLLFLGLDNAGKTTLLHMLKDDKLAQHVPTLHPTSEELSIGNMRFTTFDL 71
            |.|:.|     ||..::|.:|||.|||||:|:.||..::...:||:....|.:...|:.||.:|:
 Frog     9 FKGLFG-----KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDV 68

  Fly    72 GGHTQARRVWKDYFPAVDAIVFLIDAWDRGRFQESKNELDSLLTDEALSNCPVLILGNKIDKPGA 136
            ||..:.|.:|:.||.....::|::|:.||.|..|::.||..:|.::.|.:..:|:..||.|.|.|
 Frog    69 GGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNA 133

  Fly   137 ASEDELRNVFGLYQLTTGKGKVARADLPGRPLELFMCSVLKRQGYG--EGFRWLAQYI 192
            .:..|:.:..||:.|              |....::.:.....|.|  ||..||:..:
 Frog   134 MNAAEITDKLGLHSL--------------RHRNWYIQATCATSGDGLYEGLDWLSNQL 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sar1NP_732717.1 Sar1 2..192 CDD:206645 57/186 (31%)
arf1NP_989018.1 ARF 5..179 CDD:128474 57/188 (30%)

Return to query results.
Submit another query.