DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sar1 and arl3l1

DIOPT Version :10

Sequence 1:NP_732717.1 Gene:Sar1 / 42615 FlyBaseID:FBgn0038947 Length:193 Species:Drosophila melanogaster
Sequence 2:NP_956987.1 Gene:arl3l1 / 393666 ZFINID:ZDB-GENE-040426-1649 Length:187 Species:Danio rerio


Alignment Length:178 Identity:52/178 - (29%)
Similarity:87/178 - (48%) Gaps:12/178 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 GLWKKSGKLLFLGLDNAGKTTLLHMLKDDKLAQHVPTLHPTSEELSIGNMRFTTFDLGGHTQARR 79
            |..::..:::.||||||||||||..|..:.:....||.....:.::...|:...:|:||..:.|.
Zfish    17 GTTEQELRIVLLGLDNAGKTTLLKQLASEDVNTITPTQGFNIKSVTCDGMKLNVWDIGGQRKIRP 81

  Fly    80 VWKDYFPAVDAIVFLIDAWDRGRFQESKNELDSLLTDEALSNCPVLILGNKIDKPGAASEDELRN 144
            .||.|....|.::::||:.|:.||:|:..||..|:.:|.|...|:||..||.|...|:...|:..
Zfish    82 FWKKYLENTDLLIYVIDSADKKRFEETGLELSELIDEENLKGVPLLIFANKQDLATASPASEIAE 146

  Fly   145 VFGLYQLTTGKGKVARADLPGRPLELFMCSVLKRQGYGEGFRWLAQYI 192
            ...|:...            .|..::..||.:..:|..:|..|::..|
Zfish   147 GLNLHTYR------------DREWQIQACSAVSGEGVQDGMNWISNNI 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sar1NP_732717.1 Sar1 2..192 CDD:206645 51/176 (29%)
arl3l1NP_956987.1 Arl3 8..181 CDD:206721 51/175 (29%)

Return to query results.
Submit another query.