DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sar1 and Arl5

DIOPT Version :9

Sequence 1:NP_732717.1 Gene:Sar1 / 42615 FlyBaseID:FBgn0038947 Length:193 Species:Drosophila melanogaster
Sequence 2:NP_648201.1 Gene:Arl5 / 38931 FlyBaseID:FBgn0035866 Length:179 Species:Drosophila melanogaster


Alignment Length:181 Identity:54/181 - (29%)
Similarity:85/181 - (46%) Gaps:16/181 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LWKKSG----KLLFLGLDNAGKTTLLHMLKDDKLAQHVPTLHPTSEELSIGNMRFTTFDLGGHTQ 76
            ||:..|    ||:.:|||||||||:|:....:::....||:....||:...|:.|..:||||...
  Fly     8 LWRMFGNEEHKLVMVGLDNAGKTTILYQFLMNEVVHTSPTIGSNVEEVVWRNIHFLVWDLGGQQS 72

  Fly    77 ARRVWKDYFPAVDAIVFLIDAWDRGRFQESKNELDSLLTDEALSNCPVLILGNKIDKPGAASEDE 141
            .|..|..|:...:.::.:||:.||.|...::.||..:|..|.||...:|:..||.|..|:.|..|
  Fly    73 LRAAWSTYYTNTELVIMVIDSTDRERLAVTREELYRMLQHEDLSKASLLVYANKQDLKGSMSAAE 137

  Fly   142 LRNVFGLYQLTTGKGKVARADLPGRPLELFMCSVLKRQGYGEGFRWLAQYI 192
            :.....|..:...:..:.            .|..|..:|..:|..|:.|.|
  Fly   138 ISRQLDLTSIKKHQWHIQ------------ACCALTGEGLYQGLEWIVQRI 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sar1NP_732717.1 Sar1 2..192 CDD:206645 53/179 (30%)
Arl5NP_648201.1 Arl5_Arl8 3..175 CDD:133353 52/178 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455881
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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