DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sar1 and Arl11

DIOPT Version :9

Sequence 1:NP_732717.1 Gene:Sar1 / 42615 FlyBaseID:FBgn0038947 Length:193 Species:Drosophila melanogaster
Sequence 2:NP_001013451.1 Gene:Arl11 / 364396 RGDID:1308083 Length:173 Species:Rattus norvegicus


Alignment Length:166 Identity:60/166 - (36%)
Similarity:87/166 - (52%) Gaps:19/166 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 KLLFLGLDNAGKTTLLHMLKDDKLAQHVPTLHPTSEELSI-GNMRFTTFDLGGHTQARRVWKDYF 85
            :::.||||.|||||:|:.||.::|...:||:....|.|.. |::..|.:|:||.||.|..||||.
  Rat    12 QVVMLGLDCAGKTTILYKLKGNRLVDTLPTVGFNVEPLEAPGHVSLTLWDIGGQTQLRATWKDYL 76

  Fly    86 PAVDAIVFLIDAWDRGRFQESKNELDSLLTDEALSNCPVLILGNKIDKPGAASEDELRNVFGLYQ 150
            ..:|.:|:::|:.|..|..|:..||:.:|.|..::..|.|:|.||.:.|.|....|:||      
  Rat    77 EGIDLLVYVLDSTDEARLPEAVAELEEVLEDPNMAGVPFLVLANKQEAPDALPLLEIRN------ 135

  Fly   151 LTTGKGKVARADL---PGRPLELFMCSVLKRQGYGE 183
                     |.||   .....||..||.|..||..|
  Rat   136 ---------RLDLERFQDHCWELRACSALTGQGLQE 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sar1NP_732717.1 Sar1 2..192 CDD:206645 60/166 (36%)
Arl11NP_001013451.1 P-loop_NTPase 12..167 CDD:304359 60/166 (36%)
Ras 13..172 CDD:278499 60/165 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.