DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sar1 and Arl6

DIOPT Version :10

Sequence 1:NP_732717.1 Gene:Sar1 / 42615 FlyBaseID:FBgn0038947 Length:193 Species:Drosophila melanogaster
Sequence 2:NP_001102312.1 Gene:Arl6 / 363760 RGDID:1305535 Length:187 Species:Rattus norvegicus


Alignment Length:181 Identity:57/181 - (31%)
Similarity:95/181 - (52%) Gaps:16/181 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 GYLGLWKKSGKLLFLGLDNAGKTTLLHMLK--DDKLAQHVPTLHPTSEELSIGNMRFTTFDLGGH 74
            |.|||.||...:|.|||||:||||:::.||  :.::...|||:..:.|:....::.||.||:.|.
  Rat     9 GLLGLKKKEVHVLCLGLDNSGKTTIINKLKPSNAQVQDIVPTIGFSIEKFKSSSLSFTVFDMSGQ 73

  Fly    75 TQARRVWKDYFPAVDAIVFLIDAWDRGRFQESKNELDSLLTDEALSN--CPVLILGNKIDKPGAA 137
            .:.|.:|:.|:....||:|::|:.|:.|...:|.|||:||....:.:  .|:|...||:|...|.
  Rat    74 GRYRNLWEHYYKDGQAIIFVVDSSDKLRMVVAKEELDTLLNHPDIKHRRIPILFFANKMDLRDAV 138

  Fly   138 SEDELRNVFGLYQLTTGKGKVARADLPGRPLELFMCSVLKRQGYGEGFRWL 188
            :..::..:..|            .::..:|..:.....||.:|..||..||
  Rat   139 TSVKVSQLLCL------------ENIKDKPWHICASDALKGEGLQEGVDWL 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sar1NP_732717.1 Sar1 2..192 CDD:206645 57/181 (31%)
Arl6NP_001102312.1 Arl6 19..178 CDD:206722 51/171 (30%)

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