DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sar1 and arl4ab

DIOPT Version :10

Sequence 1:NP_732717.1 Gene:Sar1 / 42615 FlyBaseID:FBgn0038947 Length:193 Species:Drosophila melanogaster
Sequence 2:NP_956612.1 Gene:arl4ab / 338267 ZFINID:ZDB-GENE-030219-167 Length:201 Species:Danio rerio


Alignment Length:135 Identity:44/135 - (32%)
Similarity:72/135 - (53%) Gaps:6/135 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LLFLGLDNAGKTTLLHMLKDDKLAQHVPTLHPTSEELSIG---NMRFTTF---DLGGHTQARRVW 81
            ::.||||.|||||:|:.|:.::....|||....:|::.:.   ..|..||   |:||..:.|.:|
Zfish    23 IVILGLDCAGKTTVLYRLRFNEFVNTVPTKGFNTEKIKVNLGPKSRTATFHFWDVGGQEKLRPLW 87

  Fly    82 KDYFPAVDAIVFLIDAWDRGRFQESKNELDSLLTDEALSNCPVLILGNKIDKPGAASEDELRNVF 146
            :.|....|.:||::|:.|..|.:|:|.||..:...:.....|||::.||.|...|....|:..:.
Zfish    88 RSYTRCADGLVFVVDSVDAERMEEAKTELHKITRLQENLGVPVLVVANKQDLRSALPLSEVEQML 152

  Fly   147 GLYQL 151
            .|.:|
Zfish   153 ALNEL 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sar1NP_732717.1 Sar1 2..192 CDD:206645 44/135 (33%)
arl4abNP_956612.1 Arl4_Arl7 18..201 CDD:206719 44/135 (33%)

Return to query results.
Submit another query.