DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sar1 and arl8

DIOPT Version :10

Sequence 1:NP_732717.1 Gene:Sar1 / 42615 FlyBaseID:FBgn0038947 Length:193 Species:Drosophila melanogaster
Sequence 2:NP_956118.1 Gene:arl8 / 327551 ZFINID:ZDB-GENE-030131-5762 Length:179 Species:Danio rerio


Alignment Length:186 Identity:53/186 - (28%)
Similarity:83/186 - (44%) Gaps:21/186 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 IWDWFTGVLGYLGLWKKSGKLLFLGLDNAGKTTLLHMLKDDKLAQHVPTLHPTSEELSIGNMRFT 67
            :|.:|.         .:..|::.:|||||||||:|:....:::....||:....||:.:....|.
Zfish     8 LWSFFC---------NQEHKVIIVGLDNAGKTTILYQFLMNEVVHTSPTIGSNVEEIVVKKTHFL 63

  Fly    68 TFDLGGHTQARRVWKDYFPAVDAIVFLIDAWDRGRFQESKNELDSLLTDEALSNCPVLILGNKID 132
            .:|:||....|..|..|:...:.|:.::|:.||.|...||.||..:|..|.|....|||..||.|
Zfish    64 MWDIGGQESLRSSWNTYYSNTEFIILVVDSTDRERLAISKEELYRMLAHEDLRKAAVLIFANKQD 128

  Fly   133 KPGAASEDELRNVFGLYQLTTGKGKVARADLPGRPLELFMCSVLKRQGYGEGFRWL 188
            ..|..|..|      :|:..|      .:.:...|..:..|..|..:|...|..|:
Zfish   129 MKGCMSAAE------IYKYLT------LSSIKDHPWHIQSCCALTGEGLCRGLEWM 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sar1NP_732717.1 Sar1 2..192 CDD:206645 53/186 (28%)
arl8NP_956118.1 Arl5_Arl8 3..175 CDD:133353 53/186 (28%)

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