DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sar1 and Arfrp1

DIOPT Version :10

Sequence 1:NP_732717.1 Gene:Sar1 / 42615 FlyBaseID:FBgn0038947 Length:193 Species:Drosophila melanogaster
Sequence 2:NP_572526.1 Gene:Arfrp1 / 31841 FlyBaseID:FBgn0030088 Length:200 Species:Drosophila melanogaster


Alignment Length:179 Identity:59/179 - (32%)
Similarity:89/179 - (49%) Gaps:20/179 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LLFLGLDNAGKTTLLHMLKDDKLAQHVPTLHP----TSEELSIG-----NMRFTTFDLGGHTQAR 78
            ::.||||||||||.|...| ....::...|:|    |:..|:||     .:|...:||||..:.:
  Fly    20 VVILGLDNAGKTTYLEAAK-TTFTRNYKGLNPSKITTTVGLNIGTIDVQGVRLNFWDLGGQQELQ 83

  Fly    79 RVWKDYFPAVDAIVFLIDAWDRGRFQESKNELDSLLTDEALSNCPVLILGNKIDKPGAASEDELR 143
            .:|..|:.....::::||:.||.|.:|||...|.::.:|.||..|:|||.||.|.|......|::
  Fly    84 SLWDKYYQESHGVIYVIDSNDRERMEESKAIFDKMIKNELLSGVPLLILANKQDLPDVMGVREIK 148

  Fly   144 NVFGLYQLTTGKGKVARADLPGRPLELFMCSVLKRQGYGEGFRWLAQYI 192
            .||     ......:.|.|....|:     |.|..:|..||.:||.:.|
  Fly   149 PVF-----QQAGALIGRRDCLTIPV-----SALHGEGVDEGIKWLVEAI 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sar1NP_732717.1 Sar1 2..192 CDD:206645 58/177 (33%)
Arfrp1NP_572526.1 Arfrp1 19..186 CDD:206725 58/176 (33%)

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