DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sar1 and Arl13b

DIOPT Version :10

Sequence 1:NP_732717.1 Gene:Sar1 / 42615 FlyBaseID:FBgn0038947 Length:193 Species:Drosophila melanogaster
Sequence 2:XP_038944319.1 Gene:Arl13b / 304037 RGDID:1584979 Length:484 Species:Rattus norvegicus


Alignment Length:187 Identity:53/187 - (28%)
Similarity:88/187 - (47%) Gaps:22/187 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 WKKSGK---LLFLGLDNAGKTTLLHMLKDDKLAQHVPTLHPTSEELSIGNMRFTTFDLGGHTQAR 78
            |::..:   |:.:||||||||.....::.:......||:..:..:|..|....|.|||||..:.|
  Rat    15 WREPVRKVTLVMVGLDNAGKTATAKGIQGEHPEDVAPTVGFSKIDLRQGKFEVTIFDLGGGKRIR 79

  Fly    79 RVWKDYFPAVDAIVFLIDAWDRGRFQESKNELDSLLTDEALSNCPVLILGNKIDKPGAASEDELR 143
            .:||:|:.....::|::|:.|..|.:|:|..:..:|....:|..|:|:|.||.||.||..|.::.
  Rat    80 GIWKNYYAESYGVIFVVDSSDEDRMEETKETMSEVLRHPRISGKPILVLANKQDKEGALGEADVI 144

  Fly   144 NVFGLYQLTTGKGKVARADLPGRPLELFMCSVLKRQGYG--------EGFRWLAQYI 192
            ....|.:|......:.:.:         .||.:  .|||        :|..||...|
  Rat   145 ECLSLEKLVNEHKCLCQIE---------PCSAV--LGYGKKIDKSIKKGLYWLLHII 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sar1NP_732717.1 Sar1 2..192 CDD:206645 52/185 (28%)
Arl13bXP_038944319.1 Arl2l1_Arl13_like 23..189 CDD:133361 51/176 (29%)

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