DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sar1 and arf6

DIOPT Version :10

Sequence 1:NP_732717.1 Gene:Sar1 / 42615 FlyBaseID:FBgn0038947 Length:193 Species:Drosophila melanogaster
Sequence 2:NP_596822.1 Gene:arf6 / 2539937 PomBaseID:SPBC1539.08 Length:184 Species:Schizosaccharomyces pombe


Alignment Length:172 Identity:57/172 - (33%)
Similarity:95/172 - (55%) Gaps:12/172 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 KSGKLLFLGLDNAGKTTLLHMLKDDKLAQHVPTLHPTSEELSIGNMRFTTFDLGGHTQARRVWKD 83
            |..::|.||||.|||||:|:.||.::....:||:....|.::..|::|..:|:||..:.|.:|:.
pombe    20 KEMRILMLGLDAAGKTTILYKLKLNQSVVTIPTVGFNVETVTYKNIKFNVWDVGGQDKIRPLWRH 84

  Fly    84 YFPAVDAIVFLIDAWDRGRFQESKNELDSLLTDEALSNCPVLILGNKIDKPGAASEDELRNVFGL 148
            ||.....::|::|:.|..|..|::.||..:::|..:.:|.:|:|.||.|.|||.|..::.:|..|
pombe    85 YFTGTKGLIFVVDSADSNRISEARQELHRIISDREMRDCLLLVLANKQDLPGALSPAQITDVLQL 149

  Fly   149 YQLTTGKGKVARADLPGRPLELFMCSVLKRQGYGEGFRWLAQ 190
            .:|......|       :|    .|: |...|..||..||:|
pombe   150 DKLKDRLWNV-------QP----TCA-LTGDGLLEGLAWLSQ 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sar1NP_732717.1 Sar1 2..192 CDD:206645 57/172 (33%)
arf6NP_596822.1 Arf6 13..180 CDD:206716 57/172 (33%)

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