DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sar1 and warf-1

DIOPT Version :10

Sequence 1:NP_732717.1 Gene:Sar1 / 42615 FlyBaseID:FBgn0038947 Length:193 Species:Drosophila melanogaster
Sequence 2:NP_501242.1 Gene:warf-1 / 191609 WormBaseID:WBGene00000190 Length:179 Species:Caenorhabditis elegans


Alignment Length:169 Identity:58/169 - (34%)
Similarity:86/169 - (50%) Gaps:16/169 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 KLLFLGLDNAGKTTLLHMLKDDKLAQHVPTLHPTSEELSIGNMRFTTFDLGGHTQARRVWKDYFP 86
            :.|.||||.|||||:|:.||.::....:||:....|.::...:..|.:|:||..:.|.:||.|||
 Worm    19 RTLMLGLDGAGKTTILYKLKLNETVNTIPTIGFNVETVTFQKITLTVWDVGGQKKIRALWKYYFP 83

  Fly    87 AVDAIVFLIDAWDRGRFQESKNELDSLLTDEALSNCPVLILGNKIDKPGAASEDELRNVFGLYQL 151
            ....:||::|:.|..|..|:|.||.|||.:..|::..:|:..||.|.|.|.|..||..:..|..|
 Worm    84 NTTTLVFVVDSSDIERIPEAKEELFSLLAEPELADSHLLVFANKQDMPNARSPAELTQLLDLGSL 148

  Fly   152 TTGKGKVARADLPGRPLELFMCSVLKRQGYG--EGFRWL 188
                          :..|.|:|......|.|  ||..|:
 Worm   149 --------------KNREWFICGTNAHSGQGLYEGLMWV 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sar1NP_732717.1 Sar1 2..192 CDD:206645 58/169 (34%)
warf-1NP_501242.1 Arf_Arl 19..176 CDD:206644 58/169 (34%)

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