DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sar1 and arf-6

DIOPT Version :10

Sequence 1:NP_732717.1 Gene:Sar1 / 42615 FlyBaseID:FBgn0038947 Length:193 Species:Drosophila melanogaster
Sequence 2:NP_503011.1 Gene:arf-6 / 191608 WormBaseID:WBGene00000184 Length:175 Species:Caenorhabditis elegans


Alignment Length:185 Identity:53/185 - (28%)
Similarity:88/185 - (47%) Gaps:36/185 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 KKSGKLLFLGLDNAGKTTLLHMLKDDKLAQHVPTLHPTSEELSIGNMRFTTFDLGGHTQARRVWK 82
            ||..::|.||||.|||||:|:.||..:....:||:....|.::..|::|..:|:||..:.|.:|:
 Worm    11 KKELRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNIKFNVWDVGGQDKIRPLWR 75

  Fly    83 DYFPAVDAIVFLIDAWDRGRFQESKNELDSLLTDEALSNCPVLILGNKIDKPGAASEDELRNVFG 147
            .|:....|::|::||.||.|..|::.||..::.|..:....:|:..||.|...|....|:::..|
 Worm    76 HYYTGTQALIFVMDAADRDRVDEARMELHRIINDREMKEAIILVFANKQDLADAMKPHEIQDKLG 140

  Fly   148 LYQL------------TTGKGKVARADLPGRPLELFMCSVLKRQGYGEGFRWLAQ 190
            |.::            :||                        .|..||..||:|
 Worm   141 LTRIRDRNWYVQPSCASTG------------------------DGLHEGLTWLSQ 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sar1NP_732717.1 Sar1 2..192 CDD:206645 53/185 (29%)
arf-6NP_503011.1 Arf6 5..172 CDD:206716 53/185 (29%)

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