DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sar1 and arf-1

DIOPT Version :10

Sequence 1:NP_732717.1 Gene:Sar1 / 42615 FlyBaseID:FBgn0038947 Length:193 Species:Drosophila melanogaster
Sequence 2:NP_001367325.1 Gene:arf-1 / 175801 WormBaseID:WBGene00000182 Length:181 Species:Caenorhabditis elegans


Alignment Length:188 Identity:56/188 - (29%)
Similarity:96/188 - (51%) Gaps:21/188 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 FTGVLGYLGLWKKSGKLLFLGLDNAGKTTLLHMLKDDKLAQHVPTLHPTSEELSIGNMRFTTFDL 71
            |.|:.|     |:..::|.:|||.|||||:|:.||..::...:||:....|.:...|:.||.:|:
 Worm     9 FKGLFG-----KREMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDV 68

  Fly    72 GGHTQARRVWKDYFPAVDAIVFLIDAWDRGRFQESKNELDSLLTDEALSNCPVLILGNKIDKPGA 136
            ||..:.|.:|:.||.....::|::|:.||.|..|::.||..:|.::.|.:..:|:..||.|.|.|
 Worm    69 GGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEAREELMRMLAEDELRDAVLLVFANKQDLPQA 133

  Fly   137 ASEDELRNVFGLYQLTTGKGKVARADLPGRPLELFMCSVLKRQGYG--EGFRWLAQYI 192
            .:..|:.:..||:.|              |....::.:.....|.|  ||..||:..:
 Worm   134 MNAAEVTDKLGLHSL--------------RNRSWYIQATCATSGDGLYEGLDWLSNQL 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sar1NP_732717.1 Sar1 2..192 CDD:206645 56/186 (30%)
arf-1NP_001367325.1 P-loop containing Nucleoside Triphosphate Hydrolases 5..179 CDD:476819 56/188 (30%)

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