DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sar1 and ARL4C

DIOPT Version :10

Sequence 1:NP_732717.1 Gene:Sar1 / 42615 FlyBaseID:FBgn0038947 Length:193 Species:Drosophila melanogaster
Sequence 2:NP_001269360.1 Gene:ARL4C / 10123 HGNCID:698 Length:201 Species:Homo sapiens


Alignment Length:175 Identity:48/175 - (27%)
Similarity:85/175 - (48%) Gaps:16/175 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LLFLGLDNAGKTTLLHMLKDDKLAQHVPTLHPTSEELSIGN-----MRFTTFDLGGHTQARRVWK 82
            ::.||||:|||||:|:.||.::....|||:...:|::.:.|     :....:|:||..:.|.:||
Human    16 IVMLGLDSAGKTTVLYRLKFNEFVNTVPTIGFNTEKIKLSNGTAKGISCHFWDVGGQEKLRPLWK 80

  Fly    83 DYFPAVDAIVFLIDAWDRGRFQESKNELDSLLTDEALSNCPVLILGNKIDKPGAASEDELRNVFG 147
            .|....|.|::::|:.|..|.:|:|.||..:.........|:|::.||.|.|.:....|:.....
Human    81 SYSRCTDGIIYVVDSVDVDRLEEAKTELHKVTKFAENQGTPLLVIANKQDLPKSLPVAEIEKQLA 145

  Fly   148 LYQLTTGKGKVARADLPGRPLELFMCSVLKRQGYGEGFRWLAQYI 192
            |::|           :|.....:.....:..:|..||...|.:.|
Human   146 LHEL-----------IPATTYHVQPACAIIGEGLTEGMDKLYEMI 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sar1NP_732717.1 Sar1 2..192 CDD:206645 47/173 (27%)
ARL4CNP_001269360.1 Arl4_Arl7 11..192 CDD:206719 48/175 (27%)

Return to query results.
Submit another query.