DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sar1 and si:ch1073-165f9.2

DIOPT Version :10

Sequence 1:NP_732717.1 Gene:Sar1 / 42615 FlyBaseID:FBgn0038947 Length:193 Species:Drosophila melanogaster
Sequence 2:XP_002663882.2 Gene:si:ch1073-165f9.2 / 100333040 ZFINID:ZDB-GENE-141216-228 Length:181 Species:Danio rerio


Alignment Length:187 Identity:63/187 - (33%)
Similarity:96/187 - (51%) Gaps:21/187 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 YLGLW-----KKSGKLLFLGLDNAGKTTLLHMLKDDKLAQHVPTLHPTSEELSIGNMRFTTFDLG 72
            :..||     ||..:||..|||.|||||:|:.||..::...:||:....|.:...|:.||.:|..
Zfish     5 FSSLWTRLFEKKQTRLLMFGLDAAGKTTVLYKLKLGEVVTTIPTIGFNVETVEYKNISFTVWDFS 69

  Fly    73 GHTQARRVWKDYFPAVDAIVFLIDAWDRGRFQESKNELDSLLTDEALSNCPVLILGNKIDKPGAA 137
            |.|..:.:|:.|:.....::|::|:.||.|.:.:..||:.||.::.|.:..:|:|.||.|.|.|.
Zfish    70 GQTTMKSLWRHYYSNTQGLIFVVDSSDRDRIETAAEELNLLLAEDELRDAVLLVLANKQDLPKAM 134

  Fly   138 SEDELRNVFGLYQLTTGKGKVARADLPGRPLELFMCSVLKRQGYG--EGFRWLAQYI 192
            ...||.:..||:.||            ||  :.|:.|....||.|  |||.||...:
Zfish   135 LAQELTDRLGLHALT------------GR--QWFVQSTCAVQGSGLYEGFDWLTDQL 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sar1NP_732717.1 Sar1 2..192 CDD:206645 63/185 (34%)
si:ch1073-165f9.2XP_002663882.2 None

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