DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdhB and ORA1

DIOPT Version :10

Sequence 1:NP_651024.1 Gene:rdhB / 42614 FlyBaseID:FBgn0038946 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_013953.1 Gene:ORA1 / 855266 SGDID:S000004839 Length:267 Species:Saccharomyces cerevisiae


Alignment Length:247 Identity:75/247 - (30%)
Similarity:129/247 - (52%) Gaps:22/247 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVAVVTGASVGIGATTA---IELANAGMVVVGLARRVELIEALR---DQVTGVGKIFARQCDLND 68
            |..::||||.|||..||   :|.:|..|.::..|||:|.:|.|:   ||.....|:...|.|:..
Yeast    14 KTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQ 78

  Fly    69 EEQLASAFNWIREKFQAIHVLICNAG-ILKANFLSESPTKDIKELFDTNVVATASCLREALKHMA 132
            .|::......:.::|:.|.:|:.||| .|.::.:.:..|:||:::|||||.|..: :.:|:..:.
Yeast    79 AEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALIN-ITQAVLPIF 142

  Fly   133 AVKVRGHIVVMNSVLGHRIPEVPVPLFSVYPATKHAITALCQTVRQEIHFLKLNIKLTSICPGMV 197
            ..|..|.||.:.|:.|..    ..|..|:|.|:|.|:.|...::|:|:  :...|::..|.||:|
Yeast   143 QAKNSGDIVNLGSIAGRD----AYPTGSIYCASKFAVGAFTDSLRKEL--INTKIRVILIAPGLV 201

  Fly   198 DTDFLSVYSQAVAELPK--------LQARDVAKAVLYALNTPDGVQVEDIIL 241
            :|:|..|..:...|..|        |.|.|||..::||.:......:.|.::
Yeast   202 ETEFSLVRYRGNEEQAKNVYKDTTPLMADDVADLIVYATSRKQNTVIADTLI 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdhBNP_651024.1 Mgc4172-like_SDR_c 4..244 CDD:187601 75/247 (30%)
ORA1NP_013953.1 SDR_c5 14..266 CDD:187604 75/247 (30%)

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