DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdhB and AT1G01800

DIOPT Version :10

Sequence 1:NP_651024.1 Gene:rdhB / 42614 FlyBaseID:FBgn0038946 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_563635.1 Gene:AT1G01800 / 839259 AraportID:AT1G01800 Length:295 Species:Arabidopsis thaliana


Alignment Length:300 Identity:66/300 - (22%)
Similarity:110/300 - (36%) Gaps:94/300 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVAVVTGASVGIGATTAIELANAGMVVV--------GLA--RRVELIEALRDQVTGVGKIFARQC 64
            :||||||::.|||.....:|||.|:.||        |||  ::::......||.     |.....
plant     5 RVAVVTGSNKGIGFEICRQLANNGITVVLTARDENKGLAAVQKLKTENGFSDQA-----ISFHPL 64

  Fly    65 DLNDEEQLASAFNWIREKFQAIHVLICNAG---------ILKANFLSESPTKDIKELFDTNVVAT 120
            |:::.:.:||...:::.:|..:.:|:.|||         :|||.........||.::........
plant    65 DVSNPDTIASLAAFVKTRFGKLDILVNNAGVGGANVNVDVLKAQIAEAGAPTDISKIMSDTYEIV 129

  Fly   121 ASCLRE---ALKHMAAVKV-------RGHIVVMNSVLG----------------------HRIPE 153
            ..|::.   .:|.|....:       ...||.:.|.:|                      .:|.|
plant   130 EECVKTNYYGVKRMCEAMIPLLQSSDSPRIVSIASTMGKLENVSNEWAKGVLSDAENLTEEKIDE 194

  Fly   154 V------------------PVPLFSVYPATKHAITALCQTVRQEIHFLKLNIKLTSICPGMVDTD 200
            |                  |. :.|.|..:|.|:.||.:.:.:......:|    |:|||.|:|:
plant   195 VINEYLKDYKEGALQVKGWPT-VMSGYILSKAAVIALTRVLAKRHKSFIIN----SVCPGFVNTE 254

  Fly   201 ------FLSVYSQAVAELPKLQARDVAKAVLYALNTPDGV 234
                  .|||...|.:.:         |..|.....|.|:
plant   255 INFNTGILSVEEGAASPV---------KLALVPNGDPSGL 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdhBNP_651024.1 Mgc4172-like_SDR_c 4..244 CDD:187601 66/299 (22%)
AT1G01800NP_563635.1 Rossmann-fold NAD(P)(+)-binding proteins 5..295 CDD:473865 66/299 (22%)

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