DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdhB and AT5G65205

DIOPT Version :10

Sequence 1:NP_651024.1 Gene:rdhB / 42614 FlyBaseID:FBgn0038946 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_569008.1 Gene:AT5G65205 / 836644 AraportID:AT5G65205 Length:285 Species:Arabidopsis thaliana


Alignment Length:207 Identity:60/207 - (28%)
Similarity:101/207 - (48%) Gaps:12/207 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VAVVTGASV-GIGATTAIELANAGMVVVGLARRVELIEALRDQVTGVGKIFARQCDLNDEEQLAS 74
            |.::||.|. |||...|.|.:..|..||..:|..:.:..|...    .|.|.::.|:..|:.::.
plant    10 VVLITGCSQGGIGHALAREFSANGCRVVATSRSQKTMTELEKD----SKFFVQELDVQSEQSVSK 70

  Fly    75 AFNWIREKFQAIHVLICNAGILKANFLSESPTKDIKELFDTNVVATASCLREALKHMAAVKVRGH 139
            ..:.:.:||..|.||:.|||:.....|:|.|...:...|:|||:.:....:..:.|||: |.:|.
plant    71 VVSKVIDKFGQIDVLVNNAGVQCIGPLAEIPISAMDYTFNTNVLGSMRMTQAVVPHMAS-KKKGK 134

  Fly   140 IVVMNSVLGHRIPEVPVPLFSVYPATKHAITALCQTVRQEIHFLKLNIKLTSICPGMVDTDFLSV 204
            ||.:.|:    ....|.|...||.|:|.|:.||..|:|.|:.  ...|.:.:|.||.:.::..:.
plant   135 IVNIGSI----SIMAPGPWAGVYTASKAALHALTDTLRLELK--PFGIDVINIVPGGIQSNIANS 193

  Fly   205 YSQAVAELPKLQ 216
            ...:...||:|:
plant   194 GISSFNNLPELK 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdhBNP_651024.1 Mgc4172-like_SDR_c 4..244 CDD:187601 60/207 (29%)
AT5G65205NP_569008.1 17beta-HSD-like_SDR_c 10..252 CDD:187632 60/207 (29%)

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