DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdhB and HSD1

DIOPT Version :10

Sequence 1:NP_651024.1 Gene:rdhB / 42614 FlyBaseID:FBgn0038946 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_680418.1 Gene:HSD1 / 835141 AraportID:AT5G50700 Length:349 Species:Arabidopsis thaliana


Alignment Length:242 Identity:59/242 - (24%)
Similarity:102/242 - (42%) Gaps:33/242 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NFYWRNKVAVVTGASVGIGATTAIELANAGMVVVGLARRVELIEALRDQVTGVG--KIFARQCDL 66
            |.|  .||.::||||.|||...|.|.|..|..:...|||...:|.:.:....:|  .:.....|:
plant    44 NLY--GKVVLITGASSGIGEQLAYEYACRGACLALTARRKNRLEEVAEIARELGSPNVVTVHADV 106

  Fly    67 NDEEQLASAFNWIREKFQAIHVLICNAGILKANFLSESPTKDI---KELFDTNVVATASCLREAL 128
            :..:......:.....|..:..|:.|||:.:.:....  .:||   |.:.|||...:....|.||
plant   107 SKPDDCRRIVDDTITHFGRLDHLVNNAGMTQISMFEN--IEDITRTKAVLDTNFWGSVYTTRAAL 169

  Fly   129 KHMAAVKVRGHIVVMNSVLGHRIPEVPVPLFSVYPATKHAITALCQTVRQEIHFLKLNIKLTSIC 193
            .::.  :..|.||.|:|....    :..|..|.|.|:|.|:.:..:|:|.|   |..::.:|.:.
plant   170 PYLR--QSNGKIVAMSSSAAW----LTAPRMSFYNASKAALLSFFETMRIE---LGGDVHITIVT 225

  Fly   194 PGMVDTDFLS----------VYSQ-----AVAELPKLQARDVAKAVL 225
            ||.::::...          :.:|     .|...|...|...||:::
plant   226 PGYIESELTQGKYFSGEGELIVNQDMRDVQVGPFPVASASGCAKSIV 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdhBNP_651024.1 Mgc4172-like_SDR_c 4..244 CDD:187601 59/242 (24%)
HSD1NP_680418.1 Rossmann-fold NAD(P)(+)-binding proteins 47..304 CDD:473865 57/237 (24%)

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