DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdhB and HSD7

DIOPT Version :10

Sequence 1:NP_651024.1 Gene:rdhB / 42614 FlyBaseID:FBgn0038946 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_680417.1 Gene:HSD7 / 835140 AraportID:AT5G50690 Length:299 Species:Arabidopsis thaliana


Alignment Length:233 Identity:64/233 - (27%)
Similarity:109/233 - (46%) Gaps:35/233 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVAVVTGASVGIGATTAIELANAGMVVVGLARRVELIEALRDQVTGVGKIFARQCDL----NDEE 70
            ||.::||:|.|||...|.|.|..|..:..:|||.:.::.:.|:...:|     ..|:    .|..
plant    48 KVVIITGSSSGIGEHLAYEYARRGAYLTLVARREDRLQVVADRCRKLG-----SPDVAVVRGDVS 107

  Fly    71 QLASAFNWIRE---KFQAIHVLICNAGILKANFLSE-SPTKDIKELFDTNVVATASCLREALKHM 131
            .:.....:::|   :|..:..|:.||||.:|.|..: |...|:..:.:||..........|:.|:
plant   108 VIKDCKRFVQETISRFGRLDHLVNNAGIAEAKFFEDYSEISDVLPIVNTNFWGPVYATHFAIPHL 172

  Fly   132 AAVKVRGHIVVMNSVLGHRIPEVPVPLFSVYPATKHAITALCQTVRQEIHFLKLNIKLTSICPGM 196
            .  |.:|.|:.:.|..|..    .||..|:|.|:|.|:....:|:|.|:|   ..:.:|.:.||:
plant   173 K--KTKGKIIAVASPAGWS----GVPRMSIYAASKAAMINFYETLRIELH---PEVGVTIVFPGL 228

  Fly   197 VDT-----DFLSV---YSQAVA-ELPKLQARDVAKAVL 225
            ::.     |.|:.   :||.|. |    .|.:.||||:
plant   229 IENGNTNPDLLAEKQDWSQVVTIE----SAAECAKAVV 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdhBNP_651024.1 Mgc4172-like_SDR_c 4..244 CDD:187601 64/233 (27%)
HSD7NP_680417.1 11beta-HSD1_like_SDR_c 45..295 CDD:187593 64/233 (27%)

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