DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdhB and HSD3

DIOPT Version :10

Sequence 1:NP_651024.1 Gene:rdhB / 42614 FlyBaseID:FBgn0038946 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_190320.1 Gene:HSD3 / 823890 AraportID:AT3G47360 Length:309 Species:Arabidopsis thaliana


Alignment Length:243 Identity:65/243 - (26%)
Similarity:113/243 - (46%) Gaps:26/243 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MENNFYWRN---KVAVVTGASVGIGATTAIELANAGMVVVGLARRVELIEALRD--QVTGVGKIF 60
            :..|.::.|   ||.::||||.|||...|.|.|..|..:..:|||.:.:|.:.:  :..|.|.:.
plant    36 LRKNLHFENVARKVVLITGASSGIGEHVAYEYAKKGAYLALVARRRDRLEIVAETSRQLGSGNVI 100

  Fly    61 ARQCDLNDEEQLASAFNWIREKFQAIHVLICNAGILKANFLSE-SPTKDIKELFDTNVVATASCL 124
            ....|:::.|......:.....|..:..||.|||:.:.....: :..:|...:.|.|...|....
plant   101 IIPGDVSNVEDCKKFIDETIRHFGKLDHLINNAGVFQTVLFEDFTQIQDANPIMDINFWGTTYIT 165

  Fly   125 REALKHMAAVKVRGHIVVMNSVLGHRIPEVPVPLFSVYPATKHAITALCQTVRQEIHFLKLNIKL 189
            ..|:.|:.  |.:|.||.:.|...:    :|:||.|:|.|:|.|:....:|:|.|   |..:||:
plant   166 YFAIPHLR--KSKGKIVAITSGSAN----IPLPLASIYAASKAALLRFFETLRIE---LSPDIKI 221

  Fly   190 TSICPGMVDTDFLS-----------VYSQAVAELPKLQARDVAKAVLY 226
            |.:.||:|.||..:           :.|::|::..|...|.:.:...|
plant   222 TIVLPGVVSTDMTTPHCIEKYGSDFILSESVSKCAKAIFRGIGRGETY 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdhBNP_651024.1 Mgc4172-like_SDR_c 4..244 CDD:187601 65/240 (27%)
HSD3NP_190320.1 Rossmann-fold NAD(P)(+)-binding proteins 48..292 CDD:473865 63/231 (27%)

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