DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdhB and HSD2

DIOPT Version :10

Sequence 1:NP_651024.1 Gene:rdhB / 42614 FlyBaseID:FBgn0038946 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_001154667.1 Gene:HSD2 / 823889 AraportID:AT3G47350 Length:321 Species:Arabidopsis thaliana


Alignment Length:230 Identity:63/230 - (27%)
Similarity:105/230 - (45%) Gaps:23/230 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KVAVVTGASVGIGATTAIELANAGMVVVGLARRVELIEALRD--QVTGVGKIFARQCDLNDEEQL 72
            ||.::||||.|||...|.|.|..|..:..:|||.:.:|.:.:  :..|.|.:.....|:::.|..
plant    47 KVVLITGASSGIGEHVAYEYAKKGAKLALVARRKDRLEIVAETSRQLGSGDVIIIPGDVSNVEDC 111

  Fly    73 ASAFNWIREKFQAIHVLICNAGILKANFLSE-SPTKDIKELFDTNVVATASCLREALKHMAAVKV 136
            ....:.....|..:..||.|||:.:.....: :..:|...:.|.|...:......|:.|:.  |.
plant   112 KKFIDETIHHFGKLDHLINNAGVPQTVIFEDFTQIQDANSIMDINFWGSTYITYFAIPHLR--KS 174

  Fly   137 RGHIVVMNSVLGHRIPEVPVPLFSVYPATKHAITALCQTVRQEIHFLKLNIKLTSICPGMVDTD- 200
            :|.|||::|...    .:|:...|||.|:|.|:....:|:|.||   ..:||:|...||.:.|| 
plant   175 KGKIVVISSATA----IIPLQAASVYSASKAALVKFFETLRVEI---SPDIKITIALPGFISTDM 232

  Fly   201 ----FLSVY------SQAVAELPKLQARDVAKAVL 225
                |..:|      |::|:...|...|.:.:..|
plant   233 TTPQFKEMYGSDFILSESVSRCAKAIFRGIGEEFL 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdhBNP_651024.1 Mgc4172-like_SDR_c 4..244 CDD:187601 63/230 (27%)
HSD2NP_001154667.1 Rossmann-fold NAD(P)(+)-binding proteins 44..262 CDD:473865 62/223 (28%)

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