DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdhB and AT3G03330

DIOPT Version :10

Sequence 1:NP_651024.1 Gene:rdhB / 42614 FlyBaseID:FBgn0038946 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_186983.2 Gene:AT3G03330 / 821281 AraportID:AT3G03330 Length:328 Species:Arabidopsis thaliana


Alignment Length:205 Identity:62/205 - (30%)
Similarity:97/205 - (47%) Gaps:26/205 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RNKVAVVTGASVGIGATTAIELANAGMVVVGLARRVELIEALRDQVTGVGKIFARQ------CDL 66
            :.||..:||||.|||...|.:.|:....::..||....::.::.::.|.   ||.:      .||
plant    42 QGKVVWITGASRGIGEILAKQFASLDAKLILSARNKAELDRVKSELKGK---FAPEDVKVLPLDL 103

  Fly    67 -NDEEQLASAFNWIREKF--QAIHVLICNAGI----LKANFLSESPTKDIKELFDTNVVATASCL 124
             :.||.|..........|  ..:..|:.||..    .||:..||   :.:|..||.||..|.|..
plant   104 ASGEESLKHVVEQAVSLFPGAGVDYLVHNAAFERPKSKASDASE---ETLKTTFDVNVFGTISLT 165

  Fly   125 REALKHMAAVKVRGHIVVMNSVLGHRIPEVPVPLFSVYPATKHAITALCQTVRQEIHFLKLNIKL 189
            :....||.. :..||.||::|..|    :||.|..::|.|:|||:.....::|.|  |.:..||:
plant   166 KLVAPHMLK-QGGGHFVVISSAAG----KVPSPGQAIYSASKHALHGYFHSLRSE--FCQKGIKV 223

  Fly   190 TSICPGMVDT 199
            |.:|||.::|
plant   224 TVVCPGPIET 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdhBNP_651024.1 Mgc4172-like_SDR_c 4..244 CDD:187601 62/205 (30%)
AT3G03330NP_186983.2 11beta-HSD1_like_SDR_c 41..296 CDD:187593 62/205 (30%)

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