DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdhB and dhrs11b.1

DIOPT Version :9

Sequence 1:NP_001262831.1 Gene:rdhB / 42614 FlyBaseID:FBgn0038946 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_001002143.2 Gene:dhrs11b.1 / 791770 ZFINID:ZDB-GENE-040625-155 Length:255 Species:Danio rerio


Alignment Length:256 Identity:101/256 - (39%)
Similarity:145/256 - (56%) Gaps:21/256 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 WRNKVAVVTGASVGIGATTAIELANAGMVVVGLARRVELIEALRDQ-VTG--VGKIFARQCDLND 68
            |:.:||:||||||||||..|..|...||.|||.||.||.||.|..: |:|  .|.:|..:|||:.
Zfish     4 WKGRVALVTGASVGIGAAIAKALVQHGMKVVGCARNVEQIEKLAAECVSGGYSGALFPYKCDLSV 68

  Fly    69 EEQLASAFNWIREKFQAIHVLICNAGILKANFLSESPTKDIKELFDTNVVATASCLREALKHMAA 133
            |:::.|.|:||:.:.:.:.|.|.|||:.....|........:.:.:.||:..:.|.|||.:.|..
Zfish    69 EDEVLSMFSWIKAQHKGVDVCINNAGLALPEPLLNGKASGWRTMMNVNVIGLSLCTREAFQSMKE 133

  Fly   134 VKV-RGHIVVMNSVLGHRIPEVPVPLFSVYPATKHAITALCQTVRQEIHFLKLNIKLTSICPGMV 197
            ..: .|||:.:||:.|||:.......|  |.|||:|:|||.:.:|||:...|.:|:.|||.||:|
Zfish   134 RNIDDGHIININSMSGHRVVNSAYTHF--YTATKYAVTALTEGLRQELREAKTHIRATSISPGLV 196

  Fly   198 DTDFLSVY----------SQAVAELPKLQARDVAKAVLYALNTPDGVQVEDIILQQMRKVD 248
            :|:|  .|          |.....:..||..|:|.||:|.|:.|..||:.||   |||.|:
Zfish   197 ETEF--AYRLFSENQDKASATYKSIKCLQPDDLANAVVYVLSAPPHVQIGDI---QMRPVE 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdhBNP_001262831.1 Mgc4172-like_SDR_c 4..244 CDD:187601 97/250 (39%)
YdfG 9..241 CDD:226674 96/245 (39%)
dhrs11b.1NP_001002143.2 YdfG 1..253 CDD:226674 101/256 (39%)
Mgc4172-like_SDR_c 1..250 CDD:187601 99/252 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1205
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45743
OrthoDB 1 1.010 - - D1190834at2759
OrthoFinder 1 1.000 - - FOG0000588
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR43115
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
87.890

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