DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdhB and dhrs7ca

DIOPT Version :9

Sequence 1:NP_001262831.1 Gene:rdhB / 42614 FlyBaseID:FBgn0038946 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_001013557.2 Gene:dhrs7ca / 558764 ZFINID:ZDB-GENE-050320-114 Length:319 Species:Danio rerio


Alignment Length:261 Identity:67/261 - (25%)
Similarity:114/261 - (43%) Gaps:55/261 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RNKVAVVTGASVGIGATTAIELANAG---MVVVGLARRVELIEALRDQVTGVG--------KIFA 61
            ||||.::|.:...:|...| :|.:||   :::.|  ...|.:|||.:|:|...        |:. 
Zfish    44 RNKVVLITDSLSTVGNECA-KLFHAGGARLILCG--SNWEKLEALAEQLTSQSDPTLTFPPKLV- 104

  Fly    62 RQCDLNDEEQLASAFNWIREKFQAIHVLICNAGI-LKANFLSESPTKDIKELFDTNVVATASCLR 125
             :.|.:..|.:....:.|.|.|..:.||:.|:.: |||...|.|...| :.|.|.|.....:.::
Zfish   105 -ELDFSGMESVPEVISEILECFCCLDVLVFNSSMKLKAPVHSLSLQMD-RLLMDVNYFGPITLVK 167

  Fly   126 EALKHMAAVKVRGHIVVMNSVLGHRIPEVPVPLFSVYPATKHAITALCQTVRQEIH--------- 181
            ..|..:.: :..|||:::||:.|    ::.:|..:.|.|:|||:.|..:.:|.|:.         
Zfish   168 GFLPSLIS-RRSGHILLVNSIQG----KLAMPFRTTYAASKHAVQAFFECLRAEVQEYGITVSTI 227

  Fly   182 ---FLKLNIKLT------------------SICPGMVDTDFLSVYSQAVAELPKLQARDVAKAVL 225
               |:|.:..::                  .:.|..|.|:.|...|....|  .|.||.|.||.|
Zfish   228 NHTFIKTSSSISKDEITARSMKTDHRQTPPGVSPKDVATELLRTLSSKKKE--SLMARWVPKAAL 290

  Fly   226 Y 226
            |
Zfish   291 Y 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdhBNP_001262831.1 Mgc4172-like_SDR_c 4..244 CDD:187601 67/261 (26%)
YdfG 9..241 CDD:226674 66/260 (25%)
dhrs7caNP_001013557.2 11beta-HSD1_like_SDR_c 43..303 CDD:187593 67/261 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1205
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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