DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdhB and dhrs7b

DIOPT Version :9

Sequence 1:NP_001262831.1 Gene:rdhB / 42614 FlyBaseID:FBgn0038946 Length:248 Species:Drosophila melanogaster
Sequence 2:XP_021326304.1 Gene:dhrs7b / 550454 ZFINID:ZDB-GENE-050417-277 Length:316 Species:Danio rerio


Alignment Length:238 Identity:71/238 - (29%)
Similarity:116/238 - (48%) Gaps:29/238 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RNKVAVVTGASVGIGATTA--IELANAGMVVVGLARR--VELIEALRDQVTGVGKIFARQC---- 64
            ::||.|:||||.|:|...|  ...|.|.:::.|..:|  .|::|.||::..|..:.:. .|    
Zfish    43 QDKVVVITGASSGLGKECARVFHAAGARLILCGRDQRRLQEVVEELRNKTYGKTQTYT-PCTVTF 106

  Fly    65 DLNDEEQLASAFNWIREKFQAIHVLICNAGILKANFLSESPTKDIKELFDTNVVATASCLREALK 129
            ||::...:.||...|.:....|.|||.|||:.....:.::.....:|:.:||.....: |.:|:.
Zfish   107 DLSNTSVVCSAAAEILKCHGHIDVLINNAGVSYRGNILDTHVSVQREVMETNYFGPVA-LTQAIL 170

  Fly   130 HMAAVKVRGHIVVMNSVLGHRIPEVPVPLFSVYPATKHAITALCQTVRQEIHFLKLNIKLTSICP 194
            .....:..|||||::||.|    ::.:|..|.|.|:|||:.|....:|.|:..|.|::.:.|  |
Zfish   171 PSMVDRGSGHIVVISSVQG----KISIPYRSAYAASKHAMQAYYDCLRAEVDSLGLHVSVLS--P 229

  Fly   195 GMVDTDFL--------SVY-----SQAVAELPKLQARDVAKAV 224
            |.|.|:..        |.|     :.|....|...|:|:.|||
Zfish   230 GYVRTNMSINAVTGDGSKYGVMDRTTATGADPVDVAKDILKAV 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdhBNP_001262831.1 Mgc4172-like_SDR_c 4..244 CDD:187601 71/238 (30%)
YdfG 9..241 CDD:226674 71/237 (30%)
dhrs7bXP_021326304.1 11beta-HSD1_like_SDR_c 42..303 CDD:187593 71/238 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1205
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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