DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdhB and LOC3289985

DIOPT Version :10

Sequence 1:NP_651024.1 Gene:rdhB / 42614 FlyBaseID:FBgn0038946 Length:248 Species:Drosophila melanogaster
Sequence 2:XP_556135.4 Gene:LOC3289985 / 3289985 VectorBaseID:AGAMI1_002033 Length:247 Species:Anopheles gambiae


Alignment Length:240 Identity:101/240 - (42%)
Similarity:157/240 - (65%) Gaps:7/240 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 WRNKVAVVTGASVGIGATTAIELANAGMVVVGLARRVELIEALRDQV--TGVGKIFARQCDLNDE 69
            ||.|||:|||||.||||.|...||:|||:..|||||||.:|||:|::  ....::.|.:||:..|
Mosquito     4 WRGKVAIVTGASSGIGAATVKALASAGMITFGLARRVERVEALKDELPEDARERLHALRCDVTKE 68

  Fly    70 EQLASAFNWIREKFQAIHVLICNAGILKAN--FLSESPTKDIKELFDTNVVATASCLREALKHMA 132
            |.:.:||..:.::...:.|||.|||:.:::  .|....|::::::.|||:|..|.|.|||.:.|.
Mosquito    69 EDILAAFREVEQRCGGVDVLINNAGVARSSVGVLDAKNTQELRDVIDTNLVGLALCSREAYQSMK 133

  Fly   133 AVKVRGHIVVMNSVLGHRIPEVPVPLFSVYPATKHAITALCQTVRQEIHFLKLNIKLTSICPGMV 197
            ...|.||||.:||:|||::  :|:...:||||||:.:|||.:|:|.|:......||:|||.||:|
Mosquito   134 KRSVDGHIVHINSILGHKV--IPMNTLNVYPATKYGVTALTETMRHELRMAGTKIKVTSISPGLV 196

  Fly   198 DTDFLSVYSQAVAELPKLQARDVAKAVLYALNTPDGVQVEDIILQ 242
            .|:.:. .|..:.::|.|:..|:|..:||.|.||..|||.:::::
Mosquito   197 RTEIIG-DSGVLNDMPILEPEDIANGILYVLGTPPRVQVHELMIK 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdhBNP_651024.1 Mgc4172-like_SDR_c 4..244 CDD:187601 101/240 (42%)
LOC3289985XP_556135.4 None

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