DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdhB and Dhrs7c

DIOPT Version :10

Sequence 1:NP_651024.1 Gene:rdhB / 42614 FlyBaseID:FBgn0038946 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_001258527.1 Gene:Dhrs7c / 287411 RGDID:1306989 Length:311 Species:Rattus norvegicus


Alignment Length:204 Identity:48/204 - (23%)
Similarity:94/204 - (46%) Gaps:29/204 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RNKVAVVTGASVGIGATTAIELANAG---MVVVGLARRVELIEALRDQVTGV---GKIFARQ--- 63
            :|||.|:|.|..|:|...| .:.|||   :|:.|  :..|.:|:|...:|.|   .|.|..:   
  Rat    36 QNKVVVITDALSGLGKECA-RVFNAGGARLVLCG--KNWEGLESLYAALTSVADPSKTFTPKLVL 97

  Fly    64 CDLNDEEQLASAFNWIREKFQAIHVLICNAGILKANFLSESPTKDI-----KELFDTNVVATASC 123
            .||:|...:......:.:.:..:.:||.||.:     ..:.|...|     |::.|.|.....:.
  Rat    98 LDLSDISCVEDVAKEVLDCYGCVDILINNASV-----KVKGPAHKISLELDKKIMDANYFGPITF 157

  Fly   124 LREALKHMAAVKVRGHIVVMNSVLGHRIPEVPVPLFSVYPATKHAITALCQTVRQEIHFLKLNIK 188
            .:..|.:|.:.:. |.||::|::..    :..:|..:.|.|:|||:......:|.|:.  :.::.
  Rat   158 TKVLLPNMISRRT-GQIVLVNNIQA----KFGIPFRTAYAASKHAVMGFFDCLRAEVE--EYDVV 215

  Fly   189 LTSICPGMV 197
            ::::.|..:
  Rat   216 VSTVSPTFI 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdhBNP_651024.1 Mgc4172-like_SDR_c 4..244 CDD:187601 48/204 (24%)
Dhrs7cNP_001258527.1 11beta-HSD1_like_SDR_c 35..296 CDD:187593 48/204 (24%)

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