DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdhB and Dhrs7b

DIOPT Version :10

Sequence 1:NP_651024.1 Gene:rdhB / 42614 FlyBaseID:FBgn0038946 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_001008507.1 Gene:Dhrs7b / 287380 RGDID:1311243 Length:325 Species:Rattus norvegicus


Alignment Length:254 Identity:76/254 - (29%)
Similarity:120/254 - (47%) Gaps:31/254 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 YWRNKVAVVTGASVGIGATTAIELANAGMVVVGLARRVELIE----ALRDQVTGVGKIFARQC-- 64
            |.||.|.|||||:.|:|...|.....||..||...|.|:.:|    .|.|..:..|:.. :.|  
  Rat    49 YLRNAVVVVTGATSGLGKECARVFHAAGAKVVLCGRNVKALEEFTRELADSSSSQGQTH-QPCVV 112

  Fly    65 --DLNDEEQLASAFNWIREKFQAIHVLICNAGILKANFLSESPTKDIKELFDTNVVATASCLREA 127
              ||.|...:|.|...|.:.|..:.:||.||||.....:|::.....:::.:.|.....:..:..
  Rat   113 TFDLADPGAIAPAAAEILQCFGYVDILINNAGISYRGAISDTIVDVDRKVMEINYFGPVALTKAL 177

  Fly   128 LKHMAAVKVRGHIVVMNSVLGHRIPEVPVPLFSVYPATKHAITALCQTVRQEIHFLKLNIKLTSI 192
            |..|...| |||||.::|:.|    ::.:|..|.|.|:|||..|....:|.|:.  ..:|::|.|
  Rat   178 LPSMVERK-RGHIVAISSIQG----KISIPFRSAYAASKHATQAFFDCLRAEMK--DSDIEVTVI 235

  Fly   193 CPGMVDTDFLSVYS-----QAVAELPKLQAR-----DVAKAVLYALNTPDGVQVEDIIL 241
            .||.:.|: |||.:     .....|.|..|:     :||:.:..|:    |.:.:|::|
  Rat   236 SPGYIHTN-LSVNAVTADGSRYGALDKNTAQGRSAVEVAQDIFDAV----GKKKKDVLL 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdhBNP_651024.1 Mgc4172-like_SDR_c 4..244 CDD:187601 76/254 (30%)
Dhrs7bNP_001008507.1 11beta-HSD1_like_SDR_c 50..311 CDD:187593 75/253 (30%)

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