DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdhB and Cbr4

DIOPT Version :10

Sequence 1:NP_651024.1 Gene:rdhB / 42614 FlyBaseID:FBgn0038946 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_663570.2 Gene:Cbr4 / 234309 MGIID:2384567 Length:236 Species:Mus musculus


Alignment Length:239 Identity:55/239 - (23%)
Similarity:110/239 - (46%) Gaps:37/239 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 NKVAVVTGASVGIGATTAIELANAGMVVVGLARRVELIEALRDQVTGVGKIFARQCDLNDEEQLA 73
            :||..|.|.|.|||...|..:|..|..:..::|.:|:.:....::.  |...|.:||:..|:.:.
Mouse     2 DKVCAVFGGSRGIGRAVAQLMAQKGYRLAIVSRNLEVAKVTAGELG--GNHLAFRCDVAKEQDVQ 64

  Fly    74 SAFNWIREKFQAIHVLICNAGILKANFLSESPTKDIKELFDTNVVATASCLREALKHMAAVKVRG 138
            |.|..:.:....::.|:..|||.:.:.|..:.|:|:.....||::.:....:.|:|.|  ::..|
Mouse    65 STFQEMEKHLGPVNFLVNAAGINRDSLLVRTKTEDMISQLHTNLLGSMLTCKAAMKTM--IQQGG 127

  Fly   139 HIVVMNSVLGHR--IPEVPVPLFSVYPATKHAITALCQTVRQEIHFLKLNIKLTSICPGMVDTDF 201
            .||.:.|::|.:  :.:      |.|.|||..:....:::.:|:  .:..|::..:.||.:.||.
Mouse   128 SIVNVGSIIGLKGNVGQ------SAYSATKGGLVGFSRSLAKEV--ARKKIRVNVVAPGFIRTDM 184

  Fly   202 --------------LSVYSQAVAELPKLQARDVAKAVLYALNTP 231
                          |..:.:.:         :||.||::.|.:|
Mouse   185 TRHLKEEHFKKNIPLGRFGETL---------EVAHAVVFLLESP 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdhBNP_651024.1 Mgc4172-like_SDR_c 4..244 CDD:187601 55/239 (23%)
Cbr4NP_663570.2 Rossmann-fold NAD(P)(+)-binding proteins 3..232 CDD:473865 55/238 (23%)

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