DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdhB and Dhrs11

DIOPT Version :10

Sequence 1:NP_651024.1 Gene:rdhB / 42614 FlyBaseID:FBgn0038946 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_808232.2 Gene:Dhrs11 / 192970 MGIID:2652816 Length:260 Species:Mus musculus


Alignment Length:254 Identity:97/254 - (38%)
Similarity:147/254 - (57%) Gaps:17/254 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 WRNKVAVVTGASVGIGATTAIELANAGMVVVGLARRVELIEALRDQVTGV---GKIFARQCDLND 68
            ||:::|:|||||.||||..|..|...|:.|||.||.|..||.|..:....   |.:...:|||::
Mouse     9 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN 73

  Fly    69 EEQLASAFNWIREKFQAIHVLICNAGILKANFLSESPTKDIKELFDTNVVATASCLREALKHMAA 133
            ||.:.|.|:.:|.:...:.:.|.|||:.:.:.|....|...|::|:.||:|.:.|.|||.:.|..
Mouse    74 EEDILSMFSAVRSQHSGVDICINNAGMARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKE 138

  Fly   134 VKV-RGHIVVMNSVLGHRIPEVPVPLFSVYPATKHAITALCQTVRQEIHFLKLNIKLTSICPGMV 197
            ..: .|||:.:||:.|||:|  |..:...|.|||:|:|||.:.:|||:...:.:|:.|.|.||:|
Mouse   139 RNIDDGHIININSMCGHRVP--PQSVIHFYSATKYAVTALTEGLRQELLEAQTHIRATCISPGLV 201

  Fly   198 DTDF-LSVYSQAVAE-------LPKLQARDVAKAVLYALNTPDGVQVEDIILQQMRKVD 248
            :|.| ..::.:...|       :..|:..|||:||:|.|:||..|||.||   |||..:
Mouse   202 ETQFAFKLHDKDPGEAAATYEHIKCLRPEDVAEAVIYVLSTPPHVQVGDI---QMRPTE 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdhBNP_651024.1 Mgc4172-like_SDR_c 4..244 CDD:187601 94/248 (38%)
Dhrs11NP_808232.2 Mgc4172-like_SDR_c 6..256 CDD:187601 97/251 (39%)

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