DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdhB and Hsd11b1

DIOPT Version :10

Sequence 1:NP_651024.1 Gene:rdhB / 42614 FlyBaseID:FBgn0038946 Length:248 Species:Drosophila melanogaster
Sequence 2:XP_006497291.1 Gene:Hsd11b1 / 15483 MGIID:103562 Length:304 Species:Mus musculus


Alignment Length:217 Identity:53/217 - (24%)
Similarity:97/217 - (44%) Gaps:52/217 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RNKVAVVTGASVGIGATTAIELANAGMVVVGLARRVELIEALRDQVTGVGKIFARQCDLNDEEQL 72
            :.|..:|||||.|||...|..|:..|..||..||..|          |:.|:.:|..:|.     
Mouse    45 QGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEE----------GLQKVVSRCLELG----- 94

  Fly    73 ASAFNWI---REKFQAIHVLICNAG-------ILKANFLSESPTK-------DIKELFDTN---- 116
            |::.::|   .|........|..||       :|..|.::::...       .::.:.:.|    
Mouse    95 AASAHYIAGTMEDMTFAEQFIVKAGKLMGGLDMLILNHITQTSLSLFHDDIHSVRRVMEVNFLSY 159

  Fly   117 -VVATAS--CLREALKHMAAVKVRGHIVVMNSVLGHRIPEVPVPLFSVYPATKHAITALCQTVRQ 178
             |::||:  .|:::         .|.|.|::|:.|    ::..|:.:.|.|:|.|:.....|:|.
Mouse   160 VVMSTAALPMLKQS---------NGSIAVISSLAG----KMTQPMIAPYSASKFALDGFFSTIRT 211

  Fly   179 EIHFLKLNIKLTSICPGMVDTD 200
            |::..|:|:.:|....|::||:
Mouse   212 ELYITKVNVSITLCVLGLIDTE 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdhBNP_651024.1 Mgc4172-like_SDR_c 4..244 CDD:187601 53/217 (24%)
Hsd11b1XP_006497291.1 11beta-HSD1_like_SDR_c 44..291 CDD:187593 53/217 (24%)

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