DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdhB and LOC1276215

DIOPT Version :10

Sequence 1:NP_651024.1 Gene:rdhB / 42614 FlyBaseID:FBgn0038946 Length:248 Species:Drosophila melanogaster
Sequence 2:XP_061508409.1 Gene:LOC1276215 / 1276215 VectorBaseID:AGAMI1_000583 Length:340 Species:Anopheles gambiae


Alignment Length:204 Identity:64/204 - (31%)
Similarity:99/204 - (48%) Gaps:15/204 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NNFYWRNKVAVVTGASVGIGATTAIELANAGMVVVGLARRVELIEALRDQVTGVGKIFARQ---- 63
            |..:...||.::||||.|:|...|.....||..||..|||.:.:|.:|..:..:.......    
Mosquito    42 NARHLNGKVVLITGASSGLGEALAHSFFLAGCKVVLAARRKDELERVRKDLLELHATVPTHPPII 106

  Fly    64 --CDLNDEEQLASAFNWIREKFQAIHVLICNAGI-LKANFLSESPTKDIKELFDTNVVATASCLR 125
              .||:|...:......:.|...||.:|:.|.|| ::.:.||.:...||:.:. .|...:.:..:
Mosquito   107 LPLDLSDLNSIGGKVQSVLEIHGAIDILVNNGGISVRGDALSTAIDVDIRIML-VNYFGSVALTK 170

  Fly   126 EALKHMAAVKVRGHIVVMNSVLGHRIPEVPVPLFSVYPATKHAITALCQTVRQEIHFLKLNIKLT 190
            ..|..|.|.| .|.||.::||.|    :..:|..|.|.|:|||:.|.|.::|.|:  .|.|||:|
Mosquito   171 ACLPSMMARK-EGRIVSISSVQG----KFAIPHRSAYSASKHAMQAFCDSLRAEV--AKDNIKVT 228

  Fly   191 SICPGMVDT 199
            .|.||.::|
Mosquito   229 LISPGYINT 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdhBNP_651024.1 Mgc4172-like_SDR_c 4..244 CDD:187601 63/203 (31%)
LOC1276215XP_061508409.1 None

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