DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdhB and LOC1276182

DIOPT Version :10

Sequence 1:NP_651024.1 Gene:rdhB / 42614 FlyBaseID:FBgn0038946 Length:248 Species:Drosophila melanogaster
Sequence 2:XP_315496.5 Gene:LOC1276182 / 1276182 VectorBaseID:AGAMI1_002334 Length:269 Species:Anopheles gambiae


Alignment Length:240 Identity:98/240 - (40%)
Similarity:144/240 - (60%) Gaps:7/240 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 WRNKVAVVTGASVGIGATTAIELANAGMVVVGLARRVELIEALRDQVTG--VGKIFARQCDLNDE 69
            |..|||:|||||.|||||....||||||||:|||||.|.:..|:..|..  ..:|.:.:||:..|
Mosquito    27 WIGKVAIVTGASSGIGATAVKALANAGMVVIGLARRAERVLELKKSVPPEVAHRIHSHRCDVTSE 91

  Fly    70 EQLASAFNWIREKFQAIHVLICNAGI--LKANFLSESPTKDIKELFDTNVVATASCLREALKHMA 132
            :.:..||..|..:|..:.|||.|||:  |....|:.....|::.:.||||:....|.|||.:.|.
Mosquito    92 QSIVDAFALIDHQFGGVDVLINNAGVSKLTCTLLTAGNGADLRTVLDTNVMGLVLCSREAFQSMK 156

  Fly   133 AVKVRGHIVVMNSVLGHRIPEVPVPLFSVYPATKHAITALCQTVRQEIHFLKLNIKLTSICPGMV 197
            ...:.||||.:||:|||:.  :..|..::|.|:|:|:||:.:|:|.::......:|:|||.||:|
Mosquito   157 RRSIDGHIVNINSILGHKY--IGFPNLNIYGASKYAVTAITETLRNDLRNEGTRVKVTSISPGIV 219

  Fly   198 DTDFLSVYSQAVAELPKLQARDVAKAVLYALNTPDGVQVEDIILQ 242
            .|:.:....| ..:.|.|:..||..|:||||.||..|||.::|::
Mosquito   220 RTEMVPEGDQ-FQDKPMLETDDVVSAILYALGTPPHVQVHEVIIK 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdhBNP_651024.1 Mgc4172-like_SDR_c 4..244 CDD:187601 98/240 (41%)
LOC1276182XP_315496.5 None

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