DRSC/TRiP Functional Genomics Resources

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Protein Alignment rdhB and rdhB

DIOPT Version :10

Sequence 1:NP_651024.1 Gene:rdhB / 42614 FlyBaseID:FBgn0038946 Length:248 Species:Drosophila melanogaster
Sequence 2:XP_061499425.1 Gene:rdhB / 1273927 VectorBaseID:AGAMI1_003402 Length:266 Species:Anopheles gambiae


Alignment Length:231 Identity:114/231 - (49%)
Similarity:166/231 - (71%) Gaps:1/231 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 WRNKVAVVTGASVGIGATTAIELANAGMVVVGLARRVELIEALRDQVTGVGKIFARQCDLNDEEQ 71
            |..|:|:|||||.|||...|:.||:|||:|||:|||.||:..|..:|||.|||:|::||:::|.:
Mosquito     4 WVGKIALVTGASSGIGQDVALTLADAGMIVVGIARRAELVTLLSTKVTGGGKIYAKKCDVSNEGE 68

  Fly    72 LASAFNWIREKFQAIHVLICNAGILKANFLSESPTKDIKELFDTNVVATASCLREALKHMAAVKV 136
            :....||||.:|..:.|||.||||.:..|:::|.|.|.::.|:.||:||...:||.:|.|.|.:.
Mosquito    69 IMETLNWIRREFGGVDVLINNAGIYRYQFITQSETSDFRDTFNVNVLATCIFIREVVKDMQAREA 133

  Fly   137 RGHIVVMNSVLGHRIPEVPVPLFSVYPATKHAITALCQTVRQEIHFLKLNIKLTSICPGMVDTDF 201
            .|||||:||:||.|:|:|.||:|.:|||:|.|:..:.:.:|||::||||.||:|||.||||.||.
Mosquito   134 YGHIVVLNSLLGKRVPDVSVPVFGLYPASKFALVGMTEVLRQELNFLKLPIKVTSIHPGMVQTDM 198

  Fly   202 LSVYSQAVAE-LPKLQARDVAKAVLYALNTPDGVQV 236
            :.|:...:|| |||||..|:..::::.|.||..|:|
Mosquito   199 IKVFESKLAERLPKLQVTDITASIVHCLATPPEVRV 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rdhBNP_651024.1 Mgc4172-like_SDR_c 4..244 CDD:187601 114/231 (49%)
rdhBXP_061499425.1 None

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