| Sequence 1: | XP_006720943.2 | Gene: | CIITA / 4261 | HGNCID: | 7067 | Length: | 1229 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001286225.1 | Gene: | CG8197 / 35912 | FlyBaseID: | FBgn0033369 | Length: | 387 | Species: | Drosophila melanogaster |
| Alignment Length: | 445 | Identity: | 91/445 - (20%) |
|---|---|---|---|
| Similarity: | 142/445 - (31%) | Gaps: | 149/445 - (33%) |
- Green bases have known domain annotations that are detailed below.
|
Human 797 PPRAAESELAFPSFLLQCFLGALWLALSGEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLAGLI 861
Human 862 FQPPA----RCLGALLGPSAAASVDRKQKVLARYLKRLQPGTLRARQL-LELLHCAHEAEEAGIW 921
Human 922 QHVVQEL-----------------------------PGRLSFLGTRLTPPDAHVLGKAL------ 951
Human 952 ------EAAGQDFSLDL------RSTGICPSGLGSLVGLSC---VTRFRAALSDTV---ALWESL 998
Human 999 QQHGETKLLQAAEEKFTIEPFKAKSLKDVEDLGKLVQTQRTRSSSEDTAGELPAVRDLKKLEFAL 1063
Human 1064 GPVSGPQAFPKLVRILTAFSSLQHLDLDALSENKIGDEGVSQLSATFPQLKSLETLNLSQNNITD 1128
Human 1129 LG--AYKLAEALPSLAASLLRLSLYNNCICDVGAESLARVLPDMVSLR-VMDVQY 1180 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CIITA | XP_006720943.2 | NACHT | 513..682 | CDD:283404 | |
| LRR_RI | 888..1213 | CDD:238064 | 73/350 (21%) | ||
| leucine-rich repeat | 1085..1112 | CDD:275381 | 9/26 (35%) | ||
| leucine-rich repeat | 1116..1154 | CDD:275381 | 12/39 (31%) | ||
| leucine-rich repeat | 1170..1200 | CDD:275381 | 4/12 (33%) | ||
| CG8197 | NP_001286225.1 | leucine-rich repeat | 134..161 | CDD:275381 | 9/26 (35%) |
| LRR_RI | 137..374 | CDD:238064 | 63/276 (23%) | ||
| leucine-rich repeat | 162..189 | CDD:275381 | 3/26 (12%) | ||
| leucine-rich repeat | 202..220 | CDD:275380 | 3/17 (18%) | ||
| leucine-rich repeat | 223..251 | CDD:275380 | 9/47 (19%) | ||
| leucine-rich repeat | 252..279 | CDD:275380 | 6/27 (22%) | ||
| leucine-rich repeat | 280..307 | CDD:275380 | 9/29 (31%) | ||
| leucine-rich repeat | 308..335 | CDD:275380 | 8/29 (28%) | ||
| leucine-rich repeat | 336..357 | CDD:275380 | 6/20 (30%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG4308 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| User_Submission | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.900 | |||||