DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34377 and samsn1b

DIOPT Version :10

Sequence 1:NP_001262830.1 Gene:CG34377 / 42608 FlyBaseID:FBgn0263117 Length:453 Species:Drosophila melanogaster
Sequence 2:XP_005169221.2 Gene:samsn1b / 450018 ZFINID:ZDB-GENE-041010-135 Length:676 Species:Danio rerio


Alignment Length:105 Identity:25/105 - (23%)
Similarity:43/105 - (40%) Gaps:12/105 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 ANASTSMPHHNIVCEWLRTIGLAHYGESFLENGYDELEICKQIGEIDLDAIGVDNPSHRGKLLKS 138
            |:..:..|....:.|.|..:.|..:..|.|.|||..:|..:.:.|..|..:.:.:|.||.:||.:
Zfish   545 AHRRSRRPRPKTLQELLERLNLEEHISSLLLNGYQTVEDLRDLKEQHLVELNMTDPEHRHRLLAA 609

  Fly   139 VRML-------REKGAAIVYVLINDPKALSSSNEILASDC 171
            ...|       :..|..     ..:||:.|...:...:||
Zfish   610 AENLLDSEYNNQSHGET-----NEEPKSPSEEEKTELNDC 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34377NP_001262830.1 SAM_superfamily 84..144 CDD:472832 17/66 (26%)
samsn1bXP_005169221.2 None

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