DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34377 and ckn

DIOPT Version :10

Sequence 1:NP_001262830.1 Gene:CG34377 / 42608 FlyBaseID:FBgn0263117 Length:453 Species:Drosophila melanogaster
Sequence 2:NP_611009.1 Gene:ckn / 36673 FlyBaseID:FBgn0033987 Length:924 Species:Drosophila melanogaster


Alignment Length:379 Identity:85/379 - (22%)
Similarity:134/379 - (35%) Gaps:84/379 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SSSCSSAASSCNQPEPLATGVGSSGVSGASGASGASGASTSTKPQRLNKVSFAPLDLPFPSGATX 70
            |||.|:.:.|.:....|.:|..||.::|.|    :||||..           |||..|..|..: 
  Fly   196 SSSGSAGSGSRHSTASLDSGRASSYLTGVS----SSGASIR-----------APLSSPRCSSVSS 245

  Fly    71 YANANASTSMPHHNIVCEWLRTIGLAHYGESFLENGYDELEICKQIGEIDLDAIGVDNPSHRGKL 135
             .:..:.....:..::.:||..:....|.:.|:..|||...|.:...| ||.|||:.||.||.::
  Fly   246 -CSIGSVDRQRNDELIIDWLLEMKHEEYAQLFIAAGYDLPTIARMTPE-DLTAIGIKNPHHRERI 308

  Fly   136 LKSVRMLREKGAAIVYVLINDPKALSSSNE-----ILASDCDTPV------TMKELEAVMKRHLE 189
            .:.:..|:        ||.|.|..:..|.|     :...:...|:      |::::..|....||
  Fly   309 KQRIDKLQ--------VLDNLPHFVPGSIEEWLQLLRLEEYIQPLLEQNYKTVRDVTQVTWEDLE 365

  Fly   190 ADGIRLTAHPYS----------------TPEGKRGYLEGLAAHYSKQINMPYDDVLDAIEQVRLS 238
            ..||....|...                .|.|...|.:........|.|:|.......:...|:|
  Fly   366 DIGIVKLGHQKKILLAIKRVKDIISGKWNPGGANAYQQQEYQRKPWQFNVPIPSTPSYVPTTRVS 430

  Fly   239 KWKERHVRISTGHTLSRRMAGPSCSGTGLVS----------------SSVMPTSHSQPLYVPGKY 287
             |.:..:..::....|...:|.||..:.|.:                :.|:.....||   .||.
  Fly   431 -WDDTKIYATSSVLNSTAPSGSSCLNSSLANGDAYYCTGSNHECCSGNDVVLIKVRQP---RGKS 491

  Fly   288 LPSSCLSNREENEIYS------YTQNDLAN----RMARNAIDSKSALNLNGMQH 331
            |.|  |.:..:|...|      ||..|..:    ..|..|....:|..|....|
  Fly   492 LES--LEDIHDNSTRSHLTFSHYTTTDYGHFGPPTTAAAAAAMAAAATLQQQHH 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34377NP_001262830.1 SAM_superfamily 84..144 CDD:472832 19/59 (32%)
cknNP_611009.1 SAM_caskin1,2_repeat1 254..319 CDD:188896 20/73 (27%)
SAM_caskin1,2_repeat2 320..390 CDD:188897 12/69 (17%)
Caskin-tail <887..912 CDD:465209
Blue background indicates that the domain is not in the aligned region.

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