DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7084 and Slc22a28

DIOPT Version :9

Sequence 1:NP_001247235.2 Gene:CG7084 / 42606 FlyBaseID:FBgn0038938 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_001013842.2 Gene:Slc22a28 / 434674 MGIID:3645714 Length:552 Species:Mus musculus


Alignment Length:581 Identity:143/581 - (24%)
Similarity:253/581 - (43%) Gaps:75/581 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 FQALMEKAGNHGRYQTL-YNFV-FVGGLA--------FSGAMIYMNIILALNIPDHWCTVPGREN 88
            ||.|:.:.|:.||:|.| .:|| |:.||.        |:.|           ||:|.|..|..:|
Mouse     3 FQELLNQVGSLGRFQILQISFVLFLVGLVVPHITMENFTAA-----------IPNHRCWAPILDN 56

  Fly    89 TN--------FSLEEWRDITLPKQADNRGRKTFSNCEMFQMNFSEITDWSAWNSNLTK-TTEACQ 144
            ..        .|.::...|::|..::.|    ...|..|......:...:...||.|: .||.|.
Mouse    57 DTASDNGSRILSQDDLLRISIPLDSNLR----LDKCRRFAQPQWHLLHLNGTFSNETEPDTEPCV 117

  Fly   145 NGWSYDKTWYESTIPTDHNWVC--------AKDLFVTNVFVVGRVTEVAGSFILGQMGDSYGRRF 201
            :||.||::.:.|||.|:.:.||        ||..|:..:|:        |:.|.|.:.|.:||:|
Mouse   118 DGWVYDRSNFLSTIVTEWDLVCESQALNSVAKFSFMIGLFI--------GAIICGHLSDRFGRKF 174

  Fly   202 VYYISVVFCSLGRLG----SIMCTSSYTWFLIMSGIVGLTVNSLFQSPQIIGMEISREEDRSRIA 262
                 ::.|:|.:..    .:....|:..:.::..:.|::|..:..:..::.:|.:..:....:|
Mouse   175 -----ILTCALLQFAITETCVAFAPSFFIYCLLRFLAGMSVEPISVNSNLLILEWTNPKFLGMVA 234

  Fly   263 FFQSCGWSIGTTLMPLLYWWLRHWDSFMWLTSIPTAMVLLFSKYVIESPRWLISKQRFREAIVQL 327
            ...||..|||..::..|.:..|.|.......|:|.....:.::::.||.||||...:.::.:.:|
Mouse   235 VLTSCAASIGYMILAGLAFLFRIWHHLQLAMSVPIFFFFILTRWMSESARWLIVTNKPQKGLKEL 299

  Fly   328 QKIAKING--HRFDMTEKELAEIYSRDKQDVTYGIAS---LFAGWRLARNTTIMGFSWCVVAVSY 387
            :|:|.:||  :..:....|:.|...:::.:.....:|   ||....|.....::.|...:..||.
Mouse   300 RKVAHMNGMKNSGNTLTMEVVEASMKNELEAAKRKSSPRDLFHTPILRNRICVLSFMRYLFTVSI 364

  Fly   388 FTLVLFSSRMAGNPFLNFLYQSIVEIPAYVVGRYMGDTYGRRFTNSVSFLISFVTCLPIIVYSTD 452
            |.|.|....::.|..|.....|.:.|...|:|.::.:..|||.|..|  |:|......:......
Mouse   365 FGLSLHLQHLSTNIILLRFLSSALGILISVIGHFVLNHMGRRITQLV--LMSLRGIFMLTAVFVP 427

  Fly   453 ERYENLMIYLATFIKFLNALTFFTVNLQCLEIYPTCMRQTGVALGTILANAIGVLAPYLVYLGTT 517
            :..:.|.|.:.|....|::|.....||...|:.||.:|.||:.:..:..|:...|||..:.| .|
Mouse   428 QEMQTLRIIVVTLAAALSSLCMCVSNLHINELLPTTLRATGMGVIGMFGNSGLFLAPLFMLL-AT 491

  Fly   518 VDIRAPYYILGVLFLLGGIGALFLPETLHKKLPDTMEEAGHFGKHDKFFSLPKPPQAAEKD 578
            .....|:...|...:|.|.....||||.::.|||::.:.|:..|..:        ||.|:|
Mouse   492 YSANLPWIFYGGFSILYGFSVFLLPETKNQPLPDSIHDVGNDWKDSR--------QAKEED 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7084NP_001247235.2 2A0119 64..552 CDD:273328 122/513 (24%)
MFS 184..542 CDD:119392 83/366 (23%)
Slc22a28NP_001013842.2 2A0119 11..525 CDD:273328 132/544 (24%)
MFS 151..516 CDD:119392 85/380 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

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