DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7084 and SPOM_SPAPB1E7.08C

DIOPT Version :10

Sequence 1:NP_651016.1 Gene:CG7084 / 42606 FlyBaseID:FBgn0038938 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_594134.1 Gene:SPOM_SPAPB1E7.08C / 2543660 PomBaseID:SPAPB1E7.08C Length:554 Species:Schizosaccharomyces pombe


Alignment Length:492 Identity:102/492 - (20%)
Similarity:183/492 - (37%) Gaps:129/492 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 GWSYDKTWYESTIPTDHNWVCAKDLFVTNVFVVGRVTEVAG------------------SFILGQ 192
            ||..|..|     |     ||..       .::.|:.||.|                  ..::|.
pombe    88 GWMSDNIW-----P-----VCTS-------LILMRLDEVDGPHPPAEGRAPYLTLSQNLGLLVGA 135

  Fly   193 M-----GDSYGRRFVYYISVVFCSL--------GRLGSIMCTSSYTWFLIMSGIVGLTVNSLFQS 244
            |     .|:.|||:.:.::.:|..:        ....|| |.....|...:.|  .|.|:|    
pombe   136 MVWSLSADTIGRRWAFNLTFLFTGVFAVIAGASPNFASI-CVFDALWSFGVGG--NLPVDS---- 193

  Fly   245 PQIIGMEISREEDRSRIAFFQSCGWSIGTTLMPLLYWWL------------------RHWDSFMW 291
              .|.:| :.......:....|..|:||..:..|:.|.|                  :.|..|::
pombe   194 --AIFLE-ALPSSHQWLLTVMSFWWAIGQVIANLVSWGLISNFSCPDDESVCHRADNKGWRYFLF 255

  Fly   292 ----LTSIPTAMVLLFSKYVIESPRWLISKQRFREAIVQLQKIAKING-------------HRFD 339
                :|.:..|...|.|.|  |||::.::|....:|:..:.|||:|||             .|.:
pombe   256 TMGGMTLLMFAARFLVSVY--ESPKFYLAKGDDYKAVETIHKIARINGKTCTLTVEELYAIDRQE 318

  Fly   340 MTEKELAEIYSRDKQDVTYGIASL----------------FAGWRLARNTTIMGFSWCVVAVS-- 386
            ..|.:|.:..|.|.:.||.|..:|                |...:||.::.::..||.|:.::  
pombe   319 QEESDLDDSKSSDAKSVTQGTTNLIVEKLRKYNFEHIRQCFGSRKLAISSILVILSWAVIGLAFP 383

  Fly   387 -YFTLVLFSSRMAGN---------PFLNFLYQSIVEIP-AYVVGRYMGDTYGRRFTNSVSFLISF 440
             |...:.:.....||         .:.|.|..|.:.:| :.:.|..:....||:.|..:|.:::.
pombe   384 LYNAFLPYYLETRGNANEPLSVAKTYRNSLIVSAIGVPGSLIAGVLVEFRIGRKGTLCLSLILTG 448

  Fly   441 VTCLPIIVYSTDERYENLMIYLATFIKFLNALTFFTVNLQCLEIYPTCMRQTGVALGTILANAIG 505
            |    .:..||..:..|..:.......|.:.:.:..:.....|::|:.:|.|.|.|.......:|
pombe   449 V----FLFASTTAKTSNAYLGWNCTFSFFSDIMYGVLYAYTPEVFPSKVRGTAVGLAASANRILG 509

  Fly   506 VLAPYLVYLGTTVDIRAPYYILGVLFLLGGIGALFLP 542
            :.:| ::.:...:...||.::.|.||:..||..:|.|
pombe   510 IFSP-VIAMRANLTTSAPIFVSGALFIFAGILVVFFP 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7084NP_651016.1 MFS_SLC22 146..542 CDD:340875 101/490 (21%)
SPOM_SPAPB1E7.08CNP_594134.1 MFS_SV2_like 82..542 CDD:340874 100/487 (21%)

Return to query results.
Submit another query.