DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7084 and Slc22a13

DIOPT Version :9

Sequence 1:NP_001247235.2 Gene:CG7084 / 42606 FlyBaseID:FBgn0038938 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_598741.2 Gene:Slc22a13 / 102570 MGIID:2143107 Length:551 Species:Mus musculus


Alignment Length:532 Identity:130/532 - (24%)
Similarity:235/532 - (44%) Gaps:32/532 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 FQALMEKAGNHGRYQTLYNFVFVGGLAFSGA-MIYMNIILALNIPDHWCTVPGRENTNFSLEEWR 97
            |..:|.:.|:.||:|.... :.:|...|..| .|:..:.:.|: ..|.|:|...:|..|:|....
Mouse     4 FAQVMAEVGDFGRFQVRLT-ILMGIPNFLAAFFIFGQVFMVLD-EAHHCSVSWVKNHTFNLSAAE 66

  Fly    98 DITLPKQADNRGRKTFSNCEMFQ-----MNFSEITDWSAWNSNLTKTTEACQNGWSYDKTWYEST 157
            .:.:....|..||.  .:|.||:     .:..:|.      |:....|:||.:||.|.:...:| 
Mouse    67 QLAISIPNDTAGRP--ESCLMFRPPPDSASLEDIL------SHRFNETQACDSGWDYPENRPQS- 122

  Fly   158 IPTDHNWVC-AKDLFVT--NVFVVGRVTEVAGSFILGQMGDSYGRRFVYYISVVFCSLGRLGSIM 219
            :..:.:.|| .|:|..|  :||:.|.   :.|:.:.|.:.|..|||....:.|:...:..:.:..
Mouse   123 LKKEFDLVCDRKNLKKTSQSVFMAGL---LVGALVFGPVCDWIGRRPSLLMQVLLSGITSMATAF 184

  Fly   220 CTSSYTWFLIMSGIVGLTVNSLFQSPQIIGMEISREEDRSRIAFFQSCGWSIGTTLMPLLYWWLR 284
             .||:..:|.:..::.........|..::..|......|::.........::|..::..|.:.:|
Mouse   185 -VSSFELYLALRFVLATANAGFLLSTNVLISEWVGPSWRTQAVVLAQSNVALGQMVLAGLAYGVR 248

  Fly   285 HWDSFMWLTSIPTAMVLLFSKYVI-ESPRWLISKQRFREAIVQLQKIAKINGHRFDMTEKELAEI 348
            :| ..:.:|.....::|.|..:|: ||||||:|:.|..||...:||.|.:||...   ..||...
Mouse   249 NW-RLLQITGTAPVLLLFFYFWVLPESPRWLLSQGRTEEAKQLVQKAALVNGRPL---SPELLNQ 309

  Fly   349 YSRDKQDVTYGIASLFAGWRLARNTTIMGFSWCVVAVSYFTLVLFSSRMAGNPFLNFLYQSIVEI 413
            ...:|...:.....||....|.:.|.|:...|.|.::.|::|.........:.::..|....||:
Mouse   310 LVPEKTGPSGNALDLFRHPHLRKVTLILIAVWFVDSLVYYSLSFQVGDFGLDIYVTQLIFGAVEM 374

  Fly   414 PAYVVGRYMGDTYGRRFTNSVSFLISFVTCLPIIVYSTDERYENLMIYLATFIKFLNALTFFTVN 478
            |...:...|.:..||:::...:..::.:..:.||....|  ...::..||...||.:|..|....
Mouse   375 PGRFLSVLMMEKLGRKWSQLCTLTLAGIMYIIIIFIPGD--LPTVVTVLAVVGKFASAAAFTISY 437

  Fly   479 LQCLEIYPTCMRQTGVALGTILANAIGVLAPYLVYLGTTVDIRAPYYILGVLFLLGGIGALFLPE 543
            :...|::||.:||||:.|.:|.:...|::.| ||.|........|..|.|.|.:..|:....|||
Mouse   438 VYTAELFPTIIRQTGMGLVSIFSRVGGIITP-LVMLLEQYHQAIPMVIFGSLPIGAGLLCALLPE 501

  Fly   544 TLHKKLPDTMEE 555
            |..:.|.||:::
Mouse   502 TRGQTLKDTLQD 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7084NP_001247235.2 2A0119 64..552 CDD:273328 120/497 (24%)
MFS 184..542 CDD:119392 83/358 (23%)
Slc22a13NP_598741.2 2A0119 12..510 CDD:273328 126/519 (24%)
MFS 139..500 CDD:119392 87/371 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

Return to query results.
Submit another query.