DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gld2 and Mtpap

DIOPT Version :10

Sequence 1:NP_651012.2 Gene:Gld2 / 42602 FlyBaseID:FBgn0038934 Length:1364 Species:Drosophila melanogaster
Sequence 2:NP_001386242.1 Gene:Mtpap / 307050 RGDID:1310900 Length:584 Species:Rattus norvegicus


Alignment Length:685 Identity:147/685 - (21%)
Similarity:253/685 - (36%) Gaps:200/685 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   698 ISHPNSEVDGDDNQSLASFAPSVESDDSD-----SELSDASVESVARDILVSCLAVATGAEEPDF 757
            :|.|.:.|....::...|......::|..     ||:.....|...|.:|:.|            
  Rat    30 LSCPGTRVASVGSEEQPSGGAETGTEDKTLQKKFSEVQKERREQAQRTVLIHC------------ 82

  Fly   758 SGPNLVPYGDMHYLKELDKKNPPTNGYRSHRPYHQSHYAYHSQMSPRGLSCCGDMLNQHSEDLVF 822
              ||.:  .:..:||.|.:....:|           |:.|.|                       
  Rat    83 --PNNI--NEKKFLKYLSQHGSISN-----------HFFYES----------------------- 109

  Fly   823 KLDQNQPDGIESGKNIFLREITE--QPDNISVASNLSCSPSASSSKSVLAPMASK-SNITMPEEN 884
                           ..|..:.|  |.|:|:...|.:.:|:.|:..::  |..|: .|:.:...:
  Rat   110 ---------------FGLYAVVEFCQKDSINSLQNGTHTPTQSTEAAI--PFKSRFLNLKLKNPS 157

  Fly   885 ND---------DDELPLVVHNRYWREFFGYTPADRFLLRAKFVEMRRPPKVMGCKNKWDPLSLSV 940
            |.         |.:.|               |:.:.|.           :::......|....::
  Rat   158 NQVSGQSFVQADSQSP---------------PSSKKLF-----------ELLSYAESIDAQLTAL 196

  Fly   941 WKKFLESQQTRHVYKIKMRLWRAIYTVAMKNYPRYGLYLVGSSISYFGSKCSDMDI--------- 996
            .|.|   |.|....:::......|..:|...:|...::..|||::.||....|:|:         
  Rat   197 LKAF---QLTEENVRLRHLTCSLIEDIAAAYFPSCVVWPFGSSVNTFGKLGCDLDMFLDLDETGN 258

  Fly   997 ---------CMLACTNPNIDSRMEAVYH-LHVMKELLGRTNMFQDF--------NLIEARVPILR 1043
                     .::.....|:.|...|... |.|:.|.|      .:|        .::.||.|::|
  Rat   259 LSDHKNTGNFLMEFQVKNVPSERVATQKILSVIGECL------DNFGPGCVGVQKILNARCPLVR 317

  Fly  1044 FTDRCHKVEVDINFNNSVGIRNTHLLYCYSQLDWRVRPMALTVKQWAQYHNINNA-KNMTISSYS 1107
            |:.:....:.|:..|||:.::::.|||.|..||.|||.:...|:.||:.|::.:: ....|:::|
  Rat   318 FSHQGSGFQCDLTANNSIALKSSELLYIYGSLDSRVRALVFGVRCWARAHSLTSSIPGAWITNFS 382

  Fly  1108 LMLMVIHFLQVGASPPVLPCLHNLY----PEKFGLLQPNDFGYV-DMNEVMAPYQSDNSQTLGDL 1167
            |.:|||.||| ..|||:||.|.:|.    .|...:|:.|:..:: |:|::.   .|.|::||..|
  Rat   383 LTMMVIFFLQ-RRSPPILPTLDSLKSMADAEDRCILEGNNCTFIQDINKIK---PSGNTETLELL 443

  Fly  1168 LLSFLHYYSVFDYGKYAISIRVGGVLPIEVCRAATAPKNDIHQWNELCIEEPFDQT-NTARSVYD 1231
            |..|..|:..|.:.|.:|:||.|        |....|.:     :.|.|:.||:.: |.:::|  
  Rat   444 LKEFFEYFGNFAFNKNSINIRQG--------REQNKPDS-----SPLYIQNPFETSLNISKNV-- 493

  Fly  1232 TDTFERIKTIFVASYRRLDSTRNLSAIFEDYDGPTILMQ----QPSVDSEIELYEGQHHRLLPNR 1292
                         |..:|.....|:.     |...||.|    |||..|.   ..|....|||..
  Rat   494 -------------SQNQLQKFVELAR-----DSAWILEQEKKDQPSSSSH---PWGLAALLLPPG 537

  Fly  1293 GSSRSNSAIPSPRPSILMVDKATTAIWDDINNKPD 1327
            ....|.|.....:|   |.:|....:....:|.||
  Rat   538 AGQTSLSRKKKKKP---MSEKVKGLLASIKSNSPD 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gld2NP_651012.2 TRF4 <977..>1277 CDD:227585 90/337 (27%)
MtpapNP_001386242.1 RL 63..131 CDD:465510 21/132 (16%)
TRF4 184..>496 CDD:227585 89/352 (25%)
NT_PAP_TUTase 209..347 CDD:143392 30/143 (21%)

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