DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gld2 and cid11

DIOPT Version :10

Sequence 1:NP_651012.2 Gene:Gld2 / 42602 FlyBaseID:FBgn0038934 Length:1364 Species:Drosophila melanogaster
Sequence 2:NP_595210.1 Gene:cid11 / 2539762 PomBaseID:SPBC1685.06 Length:478 Species:Schizosaccharomyces pombe


Alignment Length:450 Identity:115/450 - (25%)
Similarity:201/450 - (44%) Gaps:91/450 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   945 LESQQTRHVYKIKMRL----------------WRAIYTVAMKNYPRYGLYLVGSSISYFGSKCSD 993
            ::::.|...:|:.|||                .|.|.:..:|: .:..|::.||:.:....:.||
pombe    43 VDAELTNECWKLYMRLKPSNEEVSRRQQFVDKLRTILSTEIKD-AKLDLFVFGSTENNLAIQQSD 106

  Fly   994 MDICMLACTNPNIDSRMEAVYHLHVMKELLGRTNMFQDFNLIEARVPILRFTDRCHKVEVDINFN 1058
            :|:|::...:..::|..:       :.:||....|.|...:..|||||::..|....:..|:|.|
pombe   107 VDVCIITNGSKYLNSTCQ-------LAQLLYSYGMKQIVCVSRARVPIVKIWDPQFDIHCDLNIN 164

  Fly  1059 NSVGIRNTHLLYCYSQLDWRVRPMALTVKQWAQYHNINNAKNM-TISSYSLMLMVIHFLQVGASP 1122
            |.|...||.:|..:..:|.||||:.|.:|.||:...:.:|... ||:||::..|:::|||. .:|
pombe   165 NDVAKINTKMLRLFVSIDPRVRPLGLIIKYWAKQRALCDAAGSGTITSYTISCMLVNFLQT-RNP 228

  Fly  1123 PVLPCLHNLYPEKFGLLQPNDFGYVDMNEVMAPYQSD--NSQTLGDLLLSFLHYYSV-FDYGKYA 1184
            |:||.:.:        |..||...:.:::::...:..  |..:||.||:.|.:||.. |:|....
pombe   229 PILPAMLD--------LMSNDDNKMFVDDIVGFKEKATLNKTSLGRLLIDFFYYYGFSFNYLDSV 285

  Fly  1185 ISIRVGGVLPIEVCRAATAPKNDIHQW-----NELCIEEPFDQTNTARSVYDTDTFERIKTI--- 1241
            :|:|.|.||           ......|     |.||:||||   ||||::.:|.....:|.:   
pombe   286 VSVRSGTVL-----------NKQEKGWAMEVNNSLCVEEPF---NTARNLANTADNPSVKGLQSE 336

  Fly  1242 FVASYRRL---DSTRNLSAIFEDYDGPTILMQQPSVDSEIE----------LYE--GQHHRLLPN 1291
            |..::|.:   ::...|..|.|:|       |...:.:|..          .||  |.:|.:||.
pombe   337 FQRAFRLMSENNACERLCKICEEY-------QFLDITNEANYGNTNTPFNTAYESFGCNHTVLPE 394

  Fly  1292 RGSSRSNSAIPSP--RPSILMVDKATTAIWDDINNKPDHPVLSHSNNYDATNECTGNGSL 1349
            .      :|.|.|  .|.|.:.|.........|.::.:|.  |:.|..:..::..|..||
pombe   395 A------AAYPKPYYPPQITLSDGGNMNFLYYIPDESNHQ--SYENKANRDSDFQGQTSL 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gld2NP_651012.2 TRF4 <977..>1277 CDD:227585 87/314 (28%)
cid11NP_595210.1 TRF4 1..478 CDD:227585 114/449 (25%)

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